pipeline/codes
chaopower fb36b97329 遗传分解hgvs,没有p. 采用c. 2024-02-26 10:07:00 +08:00
..
public 添加性别鉴定的位点 2024-02-22 16:46:08 +08:00
InsertAndDepthStat.R 修改目录结构 2023-12-15 10:33:49 +08:00
bam_fetch.py 修改目录结构 2023-12-15 10:33:49 +08:00
chemo.py 化疗修改,不在vcf中出现的从bam文件中获取深度 2024-02-20 15:13:06 +08:00
correct_genome_3rule.py 修改目录结构 2023-12-15 10:33:49 +08:00
correct_umi_1r_plus_2r.pl 修改目录结构 2023-12-15 10:33:49 +08:00
correct_umi_overlap_reads.py tmb 血液bug 2024-01-22 16:17:37 +08:00
correct_umi_subnormal.pl 修改目录结构 2023-12-15 10:33:49 +08:00
cromwell.examples.conf 更新 2024-01-02 02:01:20 +08:00
filter_cnv.pl 修改目录结构 2023-12-15 10:33:49 +08:00
filter_fusion.pl 修改目录结构 2023-12-15 10:33:49 +08:00
filter_longindel.pl 更新 2024-01-31 14:26:26 +08:00
filter_neoantigen.pl 增加新抗原 2023-12-21 10:22:54 +08:00
filter_promoter.pl 修改目录结构 2023-12-15 10:33:49 +08:00
filter_snpindel.pl hgvs 采用标准转录本 2024-02-26 10:06:23 +08:00
gender_dectec.py 性别鉴定 2024-01-29 13:02:36 +08:00
hereditary.py 遗传分解hgvs,没有p. 采用c. 2024-02-26 10:07:00 +08:00
indication.pl 更新indication 2023-12-15 14:41:03 +08:00
netchop.pl 流程更新 2023-12-25 14:06:30 +08:00
pollution.py 污染添加17和160图 2024-02-26 10:05:47 +08:00
postprocess.py 更新qcfail 2024-02-22 16:45:19 +08:00
qc_check.py 更新qcfail 2024-02-22 16:45:41 +08:00
qc_stat.py bug 2023-12-15 16:02:19 +08:00
qc_stat_umi.py 更新 2024-01-02 16:37:49 +08:00
run_pipeline.py 添加钉钉 2024-01-04 13:32:19 +08:00
run_wdl.py 更新qcfail 2024-02-22 16:45:19 +08:00
sample_post.py 修改目录结构 2023-12-15 10:33:49 +08:00
soft_bash 修改目录结构 2023-12-15 10:33:49 +08:00
target_therapy_cnv.pl 添加1列之后 2024-02-21 11:26:35 +08:00
target_therapy_fusion.pl 添加1列之后 2024-02-21 11:26:35 +08:00
target_therapy_longindel.pl 添加1列之后 2024-02-21 11:26:35 +08:00
target_therapy_snpindel.pl 更新 targettherpy 添加最后一列 2024-02-19 16:13:10 +08:00
vcf_add_tag_msi.pl 增加新抗原 2023-12-21 10:22:54 +08:00
vcf_add_tag_mutalt.py 修改目录结构 2023-12-15 10:33:49 +08:00
vcf_filter.py 增加新抗原 2023-12-21 10:22:54 +08:00
vcf_operations.py 微调 2023-12-29 10:11:01 +08:00