20 lines
543 B
Markdown
20 lines
543 B
Markdown
# pipeline
|
|
|
|
## run script example
|
|
```bash
|
|
export PATH=/dataseq/product/workflow/software/bin:$PATH
|
|
|
|
java17 -Dconfig.file=/home/zhangchao/project/pipeline/wdl/cromwell.examples.conf \
|
|
-jar /dataseq/product/workflow/software/cromwell-85.jar run \
|
|
--inputs /home/zhangchao/project/pipeline/workflow/test/20230814.json \
|
|
/home/zhangchao/project/pipeline/workflow/pipeline.wdl
|
|
```
|
|
|
|
## dot
|
|
```bash
|
|
womtool graph pipeline.wdl > other/pipeline.dot
|
|
dot -Tpng .\pipeline.dot -o pipeline.png
|
|
```
|
|
|
|
|