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README.md

pipeline

run script example

export PATH=/dataseq/product/workflow/software/bin:$PATH

java17 -Dconfig.file=/home/zhangchao/project/pipeline/wdl/cromwell.examples.conf \
-jar /dataseq/product/workflow/software/cromwell-85.jar run  \
--inputs /home/zhangchao/project/pipeline/workflow/test/20230814.json \
/home/zhangchao/project/pipeline/workflow/pipeline.wdl

dot

womtool graph pipeline.wdl > other/pipeline.dot
dot -Tpng .\pipeline.dot -o pipeline.png