Go to file

chaopower a5416a02ce 融合		2023-10-10 11:09:16 +08:00
other	融合	2023-10-10 11:09:16 +08:00
script	融合	2023-10-10 11:09:16 +08:00
wdl	融合	2023-10-10 11:09:16 +08:00
.gitignore	融合	2023-10-10 11:09:16 +08:00
README.md	调整call_mutation	2023-09-27 10:47:03 +08:00
pipeline.wdl	融合	2023-10-10 11:09:16 +08:00

README.md

pipeline

run script example

export PATH=/dataseq/product/workflow/software/bin:$PATH

java17 -Dconfig.file=/home/zhangchao/project/pipeline/wdl/cromwell.examples.conf \
-jar /dataseq/product/workflow/software/cromwell-85.jar run  \
--inputs /home/zhangchao/project/pipeline/workflow/test/20230814.json \
/home/zhangchao/project/pipeline/workflow/pipeline.wdl

dot

womtool graph pipeline.wdl > other/pipeline.dot