26 lines
512 B
Markdown
26 lines
512 B
Markdown
# 160 pick_variant
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1. Func.refGene 包含 ~/exonic/ 不包含 ~/ncRNA/
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2. ExonicFunc.refGene 不等于 "synonymous SNV" "unknown"
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3. 1000g2015aug_all 1000g2015aug_eas esp6500siv2_all ExAC_nontcga_ALL ExAC_nontcga_EAS gnomAD_genome_ALL gnomAD_genome_EAS < 0.01
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4. Otherinfo10 eq 'PASS'
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5. ```
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($line[$#line]!~/STR/ or (length($line[3])>=4 or length($line[4])>=4) or
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$FREQ>5)
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```
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最后一列没有STR
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Ref Alt 长度大于4 频率大于5%
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# 17
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1.
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