pipeline/script/tmb
chaopower 3077db6b3a 项目初始提交 2023-08-25 10:06:31 +08:00
..
pic 项目初始提交 2023-08-25 10:06:31 +08:00
readme.txt 项目初始提交 2023-08-25 10:06:31 +08:00
tmb_ref.txt 项目初始提交 2023-08-25 10:06:31 +08:00

readme.txt

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筛选的条件:
1.去掉silent|intron|UTR|RNA 突变(#9)
2.是Somatic突变(#26)
3.EXAC_AF_EAS<0.01(#105)
4.坐标过滤(#5,6,7)

此验证的局限性在于panel之间的cds并非全包括关系wes包含92% 650 cds, 650包含96% 160 cds。但数据的关联性较好R2均大于98%。

g160 cds:0.308103 Mb
g650 cds:1.357582 Mb
650plus50bp.bed cds:1.368272 Mb
wes cds:31.180132 Mb