# pipeline

## run script example 
```bash
export PATH=/dataseq/product/workflow/software/bin:$PATH

java17 -Dconfig.file=/home/zhangchao/project/pipeline/wdl/cromwell.examples.conf \
-jar /dataseq/product/workflow/software/cromwell-85.jar run  \
--inputs /home/zhangchao/project/pipeline/workflow/test/20230814.json \
/home/zhangchao/project/pipeline/workflow/pipeline.wdl
```

## dot 
```bash
womtool graph pipeline.wdl > other/pipeline.dot
```

![流程图](./other/pipeline.svg)