diff --git a/wdl/pollution.wdl b/wdl/pollution.wdl index da2470b..3f2e6bd 100755 --- a/wdl/pollution.wdl +++ b/wdl/pollution.wdl @@ -41,7 +41,7 @@ task run_gender_dectec { mkdir ${output_dir}/pollution fi - gender_dectec.py -n ${name} -v ${vcf} -o ${output_dir}/pollution -p ${probe} -g $PUBLIC/pollution/gender.bed + gender_dectec.py -n ${name} -v ${vcf} -v2 ${vcf2} -o ${output_dir}/pollution -p ${probe} -g $PUBLIC/pollution/gender.bed } }