diff --git a/database/chemo_database.xlsx b/database/chemo_database.xlsx new file mode 100755 index 0000000..5f636b8 Binary files /dev/null and b/database/chemo_database.xlsx differ diff --git a/database/hereditary_database.xlsx b/database/hereditary_database.xlsx new file mode 100755 index 0000000..4b1da94 Binary files /dev/null and b/database/hereditary_database.xlsx differ diff --git a/database/info.csv b/database/info.csv old mode 100644 new mode 100755 index ef857dc..c2fdd2a --- a/database/info.csv +++ b/database/info.csv @@ -1,43 +1,43 @@ project_Id,project,project_Name,report_Name,CateCode,treatResult,probe,mutation,splicing,promoter,cnv,fusion,long_indel,chemotherapy_drug,HCS,MMR,HRR_I,HRR_II,Immune_predictor -LZ103,160gene,肿瘤160基因检测(组织版),肿瘤个体化用药(160基因)检测,addTarget;addFusion;addCnv;addMsi;addMmr;addChemo;addHrr1;addHrr2;addHcs;addbigPanel,NA,160,AKT1/ALK/APC/ATM/BARD1/BCL2L11/BRAF/BRCA1/BRCA2/BRIP1/CCND1/CCND2/CCND3/CDK12/CDK4/CDK6/CDKN2A/CHEK1/CHEK2/CSF1R/CTNNB1/DDR2/EGFR/ERBB2/ERBB3/ERBB4/FANCL/FBXW7/FGFR1/FGFR2/FGFR3/FLT3/GNA11/GNAQ/HRAS/IDH1/IDH2/JAK1/JAK2/JAK3/KDR/KIT/KRAS/MAP2K1/MET/MTOR/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PDGFRB/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SMAD4/SMO/STK11/TERT/TP53/TSC1/TSC2/VHL/MDM2/MDM4/MSH2/MSH6/MLH1/PMS2/EPCAM/ATR/BAP1/BMPR1A/CDH1/FANCA/FANCM/MUTYH/NBN/ABCC2/ABCG2/ABRAXAS1/ACYP2/AR/ARID1A/ATIC/B2M/C8orf34/CBR3/CD274/CTNNA1/CYP1A1/CYP1B1/CYP2C19/CYP4B1/DHFR/DNMT3A/ERCC3/GATA3/GEN1/GREM1/HAS3/HDAC2/MLH3/MRE11/MTR/MYC/NOTCH1/NT5C2/PDCD1LG2/PNPLA3/POLD1/POLE/PPM1D/RAD50/RRM1/SCG5/SDHA/SDHB/SDHC/SDHD/SEMA3C/SLC19A1/SLC28A3/SLCO1B1/SRC/STIM1/TAP1/TAP2/TOP1/TSPAN31/TUBB1/XRCC2,MET,TERT,CDK4/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/FLT3/MET/MDM2/MDM4/CDKN2A,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,BCL2L11,ABCB1/CASP7/CDA/CYP19A1/CYP2C8/CYP2D6/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/HAS3/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XPC/XRCC1,ALK/APC/ATM/BRAF/BRCA1/BRCA2/CDH1/CDK4/CDKN2A/CHEK2/DNMT3A/EGFR/EPCAM/ERCC3/FANCA/HRAS/KRAS/MAP2K1/MET/MLH1/MSH2/MSH6/MUTYH/NBN/NF1/NRAS/PALB2/PMS2/POLD1/POLE/PTEN/RAD51D/RB1/RET/SDHA/SDHB/SDHC/SDHD/SMAD4/STK11/TP53/TSC1/TSC2/VHL,MSH2/MSH6/MLH1/PMS2/EPCAM,ATM/ATR/BARD1/BRCA1/BRCA2/BRIP1/CDK12/CHEK1/CHEK2/FANCA/FANCL/MLH1/NBN/PALB2/RAD51B/RAD51C/RAD51D/RAD54L,ARID1A/FANCM/HDAC2/POLD1/PTEN/RAD50,NA -LZ110,160gene,肿瘤160基因检测(血液版),肿瘤个体化用药(160基因)检测,addTarget;addFusion;addCnv;addMsi;addMmr;addChemo;addHrr1;addHrr2;addHcs;addbigPanel,NA,160,AKT1/ALK/APC/ATM/BARD1/BCL2L11/BRAF/BRCA1/BRCA2/BRIP1/CCND1/CCND2/CCND3/CDK12/CDK4/CDK6/CDKN2A/CHEK1/CHEK2/CSF1R/CTNNB1/DDR2/EGFR/ERBB2/ERBB3/ERBB4/FANCL/FBXW7/FGFR1/FGFR2/FGFR3/FLT3/GNA11/GNAQ/HRAS/IDH1/IDH2/JAK1/JAK2/JAK3/KDR/KIT/KRAS/MAP2K1/MET/MTOR/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PDGFRB/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SMAD4/SMO/STK11/TERT/TP53/TSC1/TSC2/VHL/MDM2/MDM4/MSH2/MSH6/MLH1/PMS2/EPCAM/ATR/BAP1/BMPR1A/CDH1/FANCA/FANCM/MUTYH/NBN/ABCC2/ABCG2/ABRAXAS1/ACYP2/AR/ARID1A/ATIC/B2M/C8orf34/CBR3/CD274/CTNNA1/CYP1A1/CYP1B1/CYP2C19/CYP4B1/DHFR/DNMT3A/ERCC3/GATA3/GEN1/GREM1/HAS3/HDAC2/MLH3/MRE11/MTR/MYC/NOTCH1/NT5C2/PDCD1LG2/PNPLA3/POLD1/POLE/PPM1D/RAD50/RRM1/SCG5/SDHA/SDHB/SDHC/SDHD/SEMA3C/SLC19A1/SLC28A3/SLCO1B1/SRC/STIM1/TAP1/TAP2/TOP1/TSPAN31/TUBB1/XRCC2,MET,TERT,CDK4/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/FLT3/MET/MDM2/MDM4/CDKN2A,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,BCL2L11,ABCB1/CASP7/CDA/CYP19A1/CYP2C8/CYP2D6/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/HAS3/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XPC/XRCC1,ALK/APC/ATM/BRAF/BRCA1/BRCA2/CDH1/CDK4/CDKN2A/CHEK2/DNMT3A/EGFR/EPCAM/ERCC3/FANCA/HRAS/KRAS/MAP2K1/MET/MLH1/MSH2/MSH6/MUTYH/NBN/NF1/NRAS/PALB2/PMS2/POLD1/POLE/PTEN/RAD51D/RB1/RET/SDHA/SDHB/SDHC/SDHD/SMAD4/STK11/TP53/TSC1/TSC2/VHL,MSH2/MSH6/MLH1/PMS2/EPCAM,ATM/ATR/BARD1/BRCA1/BRCA2/BRIP1/CDK12/CHEK1/CHEK2/FANCA/FANCL/MLH1/NBN/PALB2/RAD51B/RAD51C/RAD51D/RAD54L,ARID1A/FANCM/HDAC2/POLD1/PTEN/RAD50,NA -LZ108,682gene,肿瘤682基因检测(组织版),肿瘤精准诊疗基因检测(682基因),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo;addHrr1;addHrr2;addHcs;addbigPanel,NA,682,ABL1/AKT1/AKT2/AKT3/ALK/APC/ARAF/ATM/BARD1/BCL2L11/BRAF/BRCA1/BRCA2/BRIP1/BTK/CCND1/CCND2/CCND3/CDK12/CDK4/CDK6/CDKN2A/CDKN2B/CHEK1/CHEK2/CSF1R/CTNNB1/DDR2/EGFR/ERBB2/ERBB3/ERBB4/ESR1/EZH2/FANCL/FBXW7/FGFR1/FGFR2/FGFR3/FGFR4/FLT3/GNA11/GNAQ/HRAS/IDH1/IDH2/JAK1/JAK2/JAK3/KDR/KIT/KRAS/MAP2K1/MAP2K2/MET/MPL/MTOR/MYCN/MYD88/MDM2/MDM4/NF1/NF2/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PDGFRB/PIK3CA/PTCH1/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RAF1/RB1/RET/ROS1/SMAD4/SMARCB1/SMO/STK11/TERT/TP53/TSC1/TSC2/VHL/PPP2R2A/ARID1A/ATR/ATRX/BAP1/BLM/FANCA/FANCC/FANCD2/FANCE/FANCF/FANCG/FANCI/MDC1/MRE11/NBN/RAD50/RAD51/XRCC2/MSH2/MSH6/MLH1/PMS2/EPCAM/AXIN1/B2M/KEAP1/ERCC4/POLE/ARID1B/ARID2/EPHA3/EPHA5/EPHA7/POLD1/LRP1B/NOTCH1/NOTCH2/NOTCH3/BMPR1A/CDC73/CDH1/CEBPA/ERCC3/ERCC5/FH/FLCN/GATA2/HOXB13/MAX/MEN1/MITF/MSH3/MUTYH/PHOX2B/PMS1/PRKAR1A/PTPN11/RIT1/RNF43/SBDS/SDHA/SDHAF2/SDHB/SDHC/SDHD/SLX4/SOS1/SUFU/TMEM127/FANCB/ABCB9/ABCC2/ABCC4/ABCG2/ABRAXAS1/ACE2/ACVR1/ACVR1B/ACVR2A/ACYP2/ADGRA2/AGO2/ALOX12B/AMER1/ANKRD11/AR/ARFRP1/ARID5B/ASXL1/ASXL2/ATIC/AURKA/AURKB/AXIN2/AXL/BABAM1/BBC3/BCL10/BCL2/BCL2L1/BCL2L2/BCL6/BCOR/BCORL1/BCR/BIRC3/BIRC5/BLK/BRD4/BTG1/C8orf34/CALR/CANX/CARD11/CARM1/CASP8/CBFB/CBL/CBR3/CCN6/CCNE1/CCNQ/CD19/CD200/CD22/CD274/CD276/CD38/CD3D/CD3E/CD3G/CD40/CD52/CD74/CD79A/CD79B/CDC42/CDK2/CDK8/CDK9/CDKN1A/CDKN1B/CDKN2C/CENPA/CHD4/CHST3/CIC/COL5A1/COP1/CREBBP/CRKL/CRLF2/CSDE1/CSF3R/CSK/CSNK1A1/CTCF/CTLA4/CTNNA1/CTSB/CTSL/CTSS/CUL3/CUL4A/CXCR4/CYLD/CYP17A1/CYP1A1/CYP1B1/CYP2C19/CYP2E1/CYP4B1/CYSLTR2/DAXX/DCUN1D1/DDR1/DHFR/DICER1/DIS3/DMD/DNAJB1/DNMT1/DNMT3A/DNMT3B/DOT1L/DROSHA/DSCAM/DUSP4/E2F3/EED/EGF/EGFL7/EIF1AX/EIF4A2/EIF4E/ELF3/ELOC/EML4/EMSY/EP300/EPAS1/EPHA2/EPHB1/ERAP1/ERAP2/ERF/ERG/ERRFI1/ETV1/ETV4/ETV5/ETV6/EWSR1/EZH1/EZR/FANCM/FAS/FASTKD3/FAT1/FCGR3A/FGF1/FGF10/FGF12/FGF14/FGF19/FGF2/FGF23/FGF3/FGF4/FGF5/FGF6/FGF7/FGF8/FGF9/FGR/FLT1/FLT4/FOXA1/FOXL2/FOXO1/FOXP1/FRK/FRS2/FUBP1/FYN/GABRA6/GALNT14/GATA1/GATA3/GATA4/GATA6/GEN1/GID4/GLI1/GNA13/GNAS/GPS2/GREM1/GRIN2A/GRM3/GSK3B/H1-2/H2BC5/H3-3A/H3-3B/H3-4/H3-5/H3C1/H3C10/H3C11/H3C12/H3C13/H3C14/H3C2/H3C3/H3C4/H3C6/H3C7/H3C8/HAS3/HDAC2/HGF/HLA-A/HLA-B/HNF1A/HSD3B1/HSP90AA1/ICOSLG/ID3/IDE/IFI30/IFNGR1/IGF1/IGF1R/IGF2/IKBKE/IKZF1/IL10/IL2RA/IL2RB/IL2RG/IL6/IL7R/INHA/INHBA/INPP4A/INPP4B/INPPL1/INSR/IRF2/IRF4/IRS1/IRS2/ITK/JUN/KAT6A/KCNJ5/KDM5A/KDM5C/KDM6A/KEL/KLC3/KLF4/KLHL6/KMT2A/KMT2B/KMT2C/KMT2D/KMT5A/KNSTRN/LATS1/LATS2/LCK/LGMN/LIMK1/LMO1/LNPEP/LRIG3/LRP2/LTK/LYN/MALT1/MAP2K4/MAP2K7/MAP3K1/MAP3K13/MAP3K14/MAP4K5/MAPK1/MAPK3/MAPKAP1/MCL1/MED12/MEF2B/MERTK/MGA/MLH3/MSI1/MSI2/MST1/MST1R/MTR/MTRR/MYB/MYC/MYCL/MYOD1/NCOA3/NCOR1/NEGR1/NFE2L2/NFKBIA/NKX2-1/NKX3-1/NOS3/NOTCH4/NPEPPS/NPM1/NRDC/NRG1/NSD1/NSD2/NSD3/NT5C2/NTHL1/NUF2/NUP93/NUTM1/PAK1/PAK3/PAK5/PARP1/PARP2/PAX5/PBRM1/PCBP1/PCNA/PDCD1/PDCD1LG2/PDIA3/PDK1/PDPK1/PGR/PHF6/PIK3C2B/PIK3C2G/PIK3C3/PIK3CB/PIK3CD/PIK3CG/PIK3R1/PIK3R2/PIK3R3/PIM1/PLCG2/PLK2/PMAIP1/PNPLA3/PNRC1/POLB/POLR1G/PPARG/PPM1D/PPP2R1A/PPP4R2/PPP6C/PRDM1/PRDM14/PREX2/PRKCI/PRKD1/PRKDC/PRKN/PTGS2/PTK2/PTK6/PTP4A1/PTPRD/PTPRS/PTPRT/QKI/RAB35/RAC1/RAC2/RAD21/RAD52/RANBP2/RARA/RASA1/RBM10/RECQL/RECQL4/REL/RHEB/RHOA/RICTOR/RNU6-28P/ROCK1/RPL13/RPS6KA4/RPS6KB2/RPTOR/RRAGC/RRAS/RRAS2/RRM1/RSPO2/RTEL1/RUNX1/RXRA/RYBP/SCG5/SDC4/SEMA3C/SESN1/SESN2/SESN3/SETD2/SF3B1/SGK1/SH2B3/SH2D1A/SHOC2/SHQ1/SIK1/SLAMF7/SLC19A1/SLC22A2/SLC28A3/SLC34A2/SLCO1B1/SLCO1B3/SMAD2/SMAD3/SMARCA4/SMARCD1/SMYD3/SNCAIP/SOCS1/SOX10/SOX2/SOX17/SOX9/SPEN/SPOP/SPRED1/SPRY2/SRC/SRD5A2/SRMS/SRSF2/STAG2/STAT3/STAT4/STAT5A/STAT5B/STIM1/STK19/STK40/SUZ12/SYK/TAP1/TAP2/TAPBP/TAPBPL/TBX3/TCF3/TCF7L2/TEK/TENT5C/TERT/TET1/TET2/TGFBR1/TGFBR2/TIPARP/TMPRSS2/TNF/TNFAIP3/TNFRSF14/TNFRSF8/TNFSF11/TOP1/TP53BP1/TP63/TP73/TPP2/TRAF2/TRAF7/TSHR/TSPAN31/TUBB1/TYK2/TYRO3/U2AF1/UMPS/UPF1/VEGFA/VSIR/VTCN1/WAS/WT1/WWTR1/XIAP/XPO1/YAP1/YES1/ZFHX3/ZNF217/ZNF703,MET,TERT,CDK4/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/FLT3/MET/MYCN/MDM2/MDM4/CDKN2A/CDKN2B,ALK/BRAF/FGFR1/FGFR2/FGFR3/NTRK1/NTRK2/NTRK3/RET/ROS1,BCL2L11,ABCB1/CDA/CYP19A1/CYP2B6/CYP2C8/CYP2D6/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/NUDT15/SOD2/TPMT/TYMS/UGT1A1/XPC/XRCC1/CCND1,ALK/APC/ASXL1/ATM/ATRX/BAP1/BLM/BMPR1A/BRAF/BRCA1/BRCA2/BRIP1/CBL/CDC73/CDH1/CDK4/CDKN1B/CDKN2A/CEBPA/CHEK2/CREBBP/CTLA4/DICER1/DNMT3A/EGFR/EP300/EPCAM/ERCC4/ETV6/FANCA/FANCC/FANCD2/FANCE/FANCF/FANCG/FANCI/FANCL/FAS/FH/FLCN/GATA2/HOXB13/HRAS/IKZF1/KRAS/MAP2K1/MAP2K2/MAX/MEN1/MET/MITF/MLH1/MSH2/MSH3/MSH6/MUTYH/NBN/NF1/NF2/NKX2-1/NRAS/NTHL1/PALB2/PAX5/PHOX2B/PMS2/POLD1/POLE/PRKAR1A/PTCH1/PTEN/PTPN11/RAD51/RAD51C/RAD51D/RAF1/RB1/RET/RIT1/RNF43/RRAS2/RUNX1/SBDS/SDHA/SDHAF2/SDHB/SDHC/SDHD/SLX4/SMAD4/SMARCA4/SMARCB1/SOS1/STAT3/STK11/SUFU/TERT/TMEM127/TP53/TSC1/TSC2/VHL/WT1/XRCC2,MSH2/MSH6/MLH1/PMS2/EPCAM,ATM/ATR/BARD1/BRCA1/BRCA2/BRIP1/CDK12/CHEK1/CHEK2/FANCA/FANCL/MLH1/NBN/PALB2/RAD51B/RAD51C/RAD51D/RAD54L,ARID1A/FANCM/HDAC2/POLD1/PTEN/RAD50/PPP2R2A/ATR/ATRX/BAP1/BLM/FANCA/FANCC/FANCD2/FANCE/FANCF/FANCG/FANCI/MDC1/MRE11/NBN/RAD51/XRCC2/ARID1B/ARID2/EMSY/RAD52,MDM2/MDM4/EGFR/JAK1/JAK2/CTNNB1/AXIN1/APC/ALK/B2M/PTEN/STK11/KEAP1/ATM/ATR/BRCA1/BRCA2/CHEK1/CHEK2/BAP1/ERCC4/POLE/PALB2/RAD51C/RAD51D/ARID1A/ARID1B/ARID2/EPHA3/EPHA5/EPHA7/NF1/POLD1/LRP1B/NOTCH1/NOTCH2/NOTCH3 -LZ113,624gene,肿瘤624基因检测(血液版),肿瘤精准诊疗基因检测(624基因),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo;addHrr1;addHrr2;addHcs;addbigPanel,NA,624,ABL1/AKT1/AKT2/AKT3/ALK/APC/ARAF/ATM/BARD1/BCL2L11/BRAF/BRCA1/BRCA2/BRIP1/BTK/CCND1/CCND2/CCND3/CCNE1/CDK12/CDK4/CDKN2A/CDKN2B/CHEK1/CHEK2/CSF1R/CSF3R/CTNNB1/CXCR4/DDR2/EGFR/ERBB2/ERBB3/ERBB4/ESR1/EZH2/FANCL/FBXW7/FGFR1/FGFR2/FGFR3/FGFR4/FLT3/GNA11/GNAQ/HRAS/IDH1/IDH2/JAK1/JAK2/JAK3/KDR/KIT/KRAS/MAP2K1/MAP2K2/MDM2/MET/MPL/MTOR/MYCN/MYD88/NF1/NF2/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PDGFRB/PIK3CA/PPP2R2A/PTCH1/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RAF1/RB1/RET/ROS1/SMAD4/SMARCB1/SMO/STK11/TP53/TSC1/TSC2/VHL/ARID1A/ARID1B/ARID2/ATR/ATRX/BAP1/BLM/EMSY/FANCA/FANCC/FANCD2/FANCE/FANCG/FANCM/HDAC2/MRE11/NBN/POLD1/RAD50/RAD51/RAD52/WRN/XRCC2/MLH1/MSH2/MSH6/PMS2/EPCAM/AXIN1/B2M/CD274/EPHA3/ERCC4/FGF19/FGF3/FGF4/KEAP1/MDM4/MTAP/NFE2L2/NOTCH1/NOTCH2/POLE/RNF43/SETD2/ASXL1/CBL/CDC73/CDH1/CDKN1B/CEBPA/CREBBP/DNMT3A/EP300/ERCC3/FAS/FH/FLCN/IKZF1/MAPK1/MEN1/MITF/NKX2-1/PAX5/PRKAR1A/PTPN11/SDHA/SDHB/SDHC/SDHD/SMARCA4/STAT3/SUFU/TERC/WT1/ABL2/ACSL6/ACVR1/ACVR1B/ACVR2A/AFDN/AFF1/AFF3/AKAP9/ALDH2/ALOX12B/AMER1/AR/ARFRP1/ARHGAP5/ARHGEF12/ASXL2/ATP1A1/ATP2B3/AURKA/AURKB/AXIN2/AXL/B3GALT2/BAX/BCL11A/BCL2/BCL2L1/BCL2L12/BCL2L2/BCL3/BCL6/BCL9/BCL9L/BCLAF1/BCOR/BCORL1/BCR/BIRC6/BMP5/BMPR1A/BRD3/BRD4/BTG1/BTG2/BUB1B/CALR/CAMTA1/CARD11/CASP8/CASP9/CBFB/CCDC6/CCR4/CD209/CD22/CD70/CD74/CD79A/CD79B/CDH10/CDH11/CDK8/CDKN1A/CDKN2C/CDX2/CEP43/CEP89/CHD2/CHD4/CIC/CIITA/CLIP1/CLTC/CLTCL1/CNBD1/CNTNAP2/CNTRL/COL1A1/COL2A1/CRKL/CRLF2/CRNKL1/CRTC1/CSMD3/CTCF/CTNNA1/CTNND1/CTNND2/CUL4A/CUX1/CYLD/CYP17A1/DAXX/DCBLD1/DCC/DDB2/DDR1/DDX10/DDX5/DDX6/DGCR8/DICER1/DIS3/DNM2/DNMT1/DOT1L/DROSHA/EBF1/EED/ELL/EML4/EPHA7/EPHB1/EPHB4/EPS15/ERCC5/ERG/ERRFI1/ETV1/ETV6/EVI2A/EVI2B/EXT2/EZR/FAM135B/FAM47C/FAT1/FAT3/FAT4/FBXO11/FCGR2B/FES/FGF10/FGF12/FGF14/FGF23/FGF6/FHIT/FKBP9/FLNA/FLT1/FLT4/FOXA1/FOXL2/FOXO3/FOXP1/FUBP1/GABRA6/GAS7/GATA1/GATA2/GATA3/GATA4/GATA6/GID4/GLI1/GNA13/GNAS/GRIN2A/GRM3/GSK3B/GSTTP2/H3-3A/H3C2/H4C9/HDAC1/HERPUD1/HGF/HIF1A/HIF1A-AS3/HIP1/HLA-A/HLA-B/HLA-C/HMGA1/HNF1A/HNRNPA2B1/HOXA11/HSP90AA1/HSP90AB1/ID3/IGF1R/IKBKE/IL6ST/IL7R/INPP4B/IRF2/IRF4/IRS2/IRS4/ISX/ITGAV/ITK/JUN/KAT6A/KAT6B/KAT7/KCNJ5/KDM5A/KDM5C/KDM6A/KEL/KIAA1549/KLF4/KLHL6/KMT2A/KMT2C/KMT2D/KNL1/KNSTRN/KTN1/LARP4B/LATS1/LATS2/LHFPL6/LMNA/LMO1/LMO2/LOC101928140/LOC645967/LPP/LRIG3/LRP1B/LRRC4/LSM14A/LTK/LYN/LZTR1/MACC1/MAF/MAP2K4/MAP3K13/MAX/MB21D2/MCL1/MECOM/MED12/MEF2B/MERTK/MKNK1/MLH3/MLLT3/MSI2/MSN/MST1R/MUC1/MUC16/MUC4/MYB/MYC/MYCL/MYH11/MYOD1/N4BP2/NAB2/NACA/NBEA/NCOA2/NCOR1/NCOR2/NDRG1/NFATC2/NFKB2/NFKBIA/NFKBIE/NIN/NOTCH3/NPIPB2/NPM1/NRG1/NSD1/NSD2/NSD3/NUMA1/NUP214/NUTM2B/OLIG2/P2RY8/PABPC1/PARP1/PARP2/PARP3/PAX3/PBRM1/PCBP1/PCM1/PDCD1/PDCD1LG2/PDE4DIP/PDK1/PER1/PIK3C2B/PIK3C2G/PIK3CB/PIK3R1/PIM1/PLCG1/PMS1/POLQ/PPARG/PPFIBP1/PPM1D/PPP2R1A/PPP6C/PRCC/PRDM1/PRDM2/PREX2/PRKACA/PRKCB/PRKCI/PRKN/PTPN13/PTPN6/PTPRB/PTPRC/PTPRD/PTPRO/PTPRT/QKI/RABEP1/RAC1/RAD21/RANBP2/RARA/RBM10/RBM15/RECQL4/REL/RGPD3/RGS7/RHOA/RICTOR/RIT1/RNF213/ROBO2/RPL10/RPL22/RPL5/RPTOR/RUNX1/RUNX1T1/SALL4/SDC4/SEPTIN9/SETBP1/SETD1B/SETDB1/SF3B1/SGK1/SH2B3/SHTN1/SIRPA/SIX1/SIX2/SLC34A2/SMAD2/SMAD3/SMARCE1/SMC1A/SNCAIP/SNX29/SOCS1/SOX2/SOX9/SPECC1/SPEN/SPOP/SRC/SRSF2/SS18/SSX1/STAG1/STAG2/STAT5B/STAT6/STIL/SYK/TAL2/TAP1/TAP2/TBL1XR1/TBX3/TCEA1/TCF3/TCF7L2/TEC/TEK/TENT5C/TERT/TET1/TET2/TFE3/TFG/THRAP3/TIPARP/TMPRSS2/TNC/TNFAIP3/TNFRSF14/TNFRSF17/TP63/TPR/TRAF7/TRIM24/TRIM33/TRIP11/TRRAP/TSHR/TYRO3/U2AF1/UBR5/USP6/USP8/VEGFA/WAS/WNK2/XPO1/ZEB1/ZFHX3/ZMYM2/ZMYM3/ZNF217/ZNF479/ZNF703/ZNRF3/ZRSR2/TERT,MET,TERT,ALK/ATM/B2M/CCND1/CCND2/CCND3/CCNE1/CD274/CDK4/CDKN2A/CDKN2B/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/FLT3/MDM2/MDM4/MET/MYCN/NF2/PTEN/RB1/SMARCB1,ALK/BRAF/FGFR1/FGFR2/FGFR3/MET/NTRK1/NTRK2/NTRK3/PDGFRA/RET/ROS1,BCL2L11,ABCB1/ABCG2/ACYP2/CASP7/CDA/CEP72/CYP19A1/CYP2B6/CYP2D6/CYP3A4/DHFR/DPYD/ERCC1/ERCC2/GSTP1/HAS3/MTHFR/MUTYH/NQO1/NUDT15/PNPLA3/RRM1/SLCO1B1/SLCO1B3/SOD2/TP53/TPMT/TYMS/UGT1A1/XRCC1,ALK/APC/ASXL1/ATM/ATRX/BAP1/BLM/BMPR1A/BRAF/BRCA1/BRCA2/BRIP1/CBL/CDC73/CDH1/CDK4/CDKN1B/CDKN2A/CEBPA/CHEK2/CREBBP/DICER1/DNMT3A/EGFR/EP300/EPCAM/ERCC3/ERCC4/ETV6/FANCA/FANCC/FANCD2/FANCE/FANCG/FANCL/FANCM/FAS/FH/FLCN/GATA2/HRAS/IKZF1/KRAS/LZTR1/MAP2K1/MAP2K2/MAPK1/MEN1/MET/MITF/MLH1/MSH2/MSH3/MSH6/MUTYH/NBN/NF1/NF2/NKX2-1/NRAS/PALB2/PAX5/PMS2/POLD1/POLE/PRKAR1A/PTCH1/PTEN/PTPN11/RAD51/RAD51C/RAD51D/RAF1/RB1/RET/RNF43/RUNX1/SDHA/SDHB/SDHC/SDHD/SMAD4/SMARCA4/SMARCB1/STAT3/STK11/SUFU/TERC/TP53/TSC1/TSC2/VHL/WRN/WT1/XRCC2,MSH2/MSH6/MLH1/PMS2/EPCAM,ATM/ATR/BARD1/BRCA1/BRCA2/BRIP1/CDK12/CHEK1/CHEK2/FANCA/FANCL/MLH1/NBN/PALB2/RAD51B/RAD51C/RAD51D/RAD54L,ARID1A/FANCM/HDAC2/POLD1/PTEN/RAD50/PPP2R2A/ATR/ATRX/BAP1/BLM/FANCA/FANCC/FANCD2/FANCE/FANCG/MRE11/NBN/RAD51/XRCC2/ARID1B/ARID2/EMSY/RAD52/WRN,CCND1/ALK/APC/ARID1A/ATM/ATR/AXIN1/B2M/BAP1/BRCA1/BRCA2/BRIP1/CD274/CDK12/CDKN2A/CDKN2B/CHEK1/CHEK2/CTNNB1/EGFR/EPHA3/ERCC4/FGF19/FGF3/FGF4/JAK1/JAK2/KEAP1/MDM2/MDM4/MRE11/MTAP/NBN/NF1/NFE2L2/NOTCH1/NOTCH2/NTRK3/PALB2/POLD1/POLE/PTEN/RAD50/RAD51C/RAD51D/RNF43/SETD2/SMO/STK11 +LZ103,160gene,肿瘤160基因检测(组织版),肿瘤个体化用药(160基因)检测,addTarget;addFusion;addCnv;addMsi;assMmr;addChemo;addHrr1;addHrr2;addHcs;addbigPanel,NA,160,AKT1/ALK/APC/ATM/BARD1/BCL2L11/BRAF/BRCA1/BRCA2/BRIP1/CCND1/CCND2/CCND3/CDK12/CDK4/CDK6/CDKN2A/CHEK1/CHEK2/CSF1R/CTNNB1/DDR2/EGFR/ERBB2/ERBB3/ERBB4/FANCL/FBXW7/FGFR1/FGFR2/FGFR3/FLT3/GNA11/GNAQ/HRAS/IDH1/IDH2/JAK1/JAK2/JAK3/KDR/KIT/KRAS/MAP2K1/MET/MTOR/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PDGFRB/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SMAD4/SMO/STK11/TERT/TP53/TSC1/TSC2/VHL/MDM2/MDM4/MSH2/MSH6/MLH1/PMS2/EPCAM/ATR/BAP1/BMPR1A/CDH1/FANCA/FANCM/MUTYH/NBN/ABCC2/ABCG2/ABRAXAS1/ACYP2/AR/ARID1A/ATIC/B2M/C8orf34/CBR3/CD274/CTNNA1/CYP1A1/CYP1B1/CYP2C19/CYP4B1/DHFR/DNMT3A/ERCC3/GATA3/GEN1/GREM1/HAS3/HDAC2/MLH3/MRE11/MTR/MYC/NOTCH1/NT5C2/PDCD1LG2/PNPLA3/POLD1/POLE/PPM1D/RAD50/RRM1/SCG5/SDHA/SDHB/SDHC/SDHD/SEMA3C/SLC19A1/SLC28A3/SLCO1B1/SRC/STIM1/TAP1/TAP2/TOP1/TSPAN31/TUBB1/XRCC2,MET,TERT,CDK4/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/FLT3/MET/MDM2/MDM4/CDKN2A,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,BCL2L11,ABCB1/CASP7/CDA/CYP19A1/CYP2C8/CYP2D6/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/HAS3/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XPC/XRCC1,ALK/APC/ATM/BRAF/BRCA1/BRCA2/CDH1/CDK4/CDKN2A/CHEK2/DNMT3A/EGFR/EPCAM/ERCC3/FANCA/HRAS/KRAS/MAP2K1/MET/MLH1/MSH2/MSH6/MUTYH/NBN/NF1/NRAS/PALB2/PMS2/POLD1/POLE/PTEN/RAD51D/RB1/RET/SDHA/SDHB/SDHC/SDHD/SMAD4/STK11/TP53/TSC1/TSC2/VHL,MSH2/MSH6/MLH1/PMS2/EPCAM,ATM/ATR/BARD1/BRCA1/BRCA2/BRIP1/CDK12/CHEK1/CHEK2/FANCA/FANCL/MLH1/NBN/PALB2/RAD51B/RAD51C/RAD51D/RAD54L,ARID1A/FANCM/HDAC2/POLD1/PTEN/RAD50,NA +LZ110,160gene,肿瘤160基因检测(血液版),肿瘤个体化用药(160基因)检测,addTarget;addFusion;addCnv;addMsi;assMmr;addChemo;addHrr1;addHrr2;addHcs;addbigPanel,NA,160,AKT1/ALK/APC/ATM/BARD1/BCL2L11/BRAF/BRCA1/BRCA2/BRIP1/CCND1/CCND2/CCND3/CDK12/CDK4/CDK6/CDKN2A/CHEK1/CHEK2/CSF1R/CTNNB1/DDR2/EGFR/ERBB2/ERBB3/ERBB4/FANCL/FBXW7/FGFR1/FGFR2/FGFR3/FLT3/GNA11/GNAQ/HRAS/IDH1/IDH2/JAK1/JAK2/JAK3/KDR/KIT/KRAS/MAP2K1/MET/MTOR/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PDGFRB/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SMAD4/SMO/STK11/TERT/TP53/TSC1/TSC2/VHL/MDM2/MDM4/MSH2/MSH6/MLH1/PMS2/EPCAM/ATR/BAP1/BMPR1A/CDH1/FANCA/FANCM/MUTYH/NBN/ABCC2/ABCG2/ABRAXAS1/ACYP2/AR/ARID1A/ATIC/B2M/C8orf34/CBR3/CD274/CTNNA1/CYP1A1/CYP1B1/CYP2C19/CYP4B1/DHFR/DNMT3A/ERCC3/GATA3/GEN1/GREM1/HAS3/HDAC2/MLH3/MRE11/MTR/MYC/NOTCH1/NT5C2/PDCD1LG2/PNPLA3/POLD1/POLE/PPM1D/RAD50/RRM1/SCG5/SDHA/SDHB/SDHC/SDHD/SEMA3C/SLC19A1/SLC28A3/SLCO1B1/SRC/STIM1/TAP1/TAP2/TOP1/TSPAN31/TUBB1/XRCC2,MET,TERT,CDK4/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/FLT3/MET/MDM2/MDM4/CDKN2A,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,BCL2L11,ABCB1/CASP7/CDA/CYP19A1/CYP2C8/CYP2D6/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/HAS3/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XPC/XRCC1,ALK/APC/ATM/BRAF/BRCA1/BRCA2/CDH1/CDK4/CDKN2A/CHEK2/DNMT3A/EGFR/EPCAM/ERCC3/FANCA/HRAS/KRAS/MAP2K1/MET/MLH1/MSH2/MSH6/MUTYH/NBN/NF1/NRAS/PALB2/PMS2/POLD1/POLE/PTEN/RAD51D/RB1/RET/SDHA/SDHB/SDHC/SDHD/SMAD4/STK11/TP53/TSC1/TSC2/VHL,MSH2/MSH6/MLH1/PMS2/EPCAM,ATM/ATR/BARD1/BRCA1/BRCA2/BRIP1/CDK12/CHEK1/CHEK2/FANCA/FANCL/MLH1/NBN/PALB2/RAD51B/RAD51C/RAD51D/RAD54L,ARID1A/FANCM/HDAC2/POLD1/PTEN/RAD50,NA +LZ108,682gene,肿瘤682基因检测(组织版),肿瘤精准诊疗基因检测(682基因),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo;addHrr1;addHrr2;addHcs;addbigPanel;addTmb,NA,682,ABL1/AKT1/AKT2/AKT3/ALK/APC/ARAF/ATM/BARD1/BCL2L11/BRAF/BRCA1/BRCA2/BRIP1/BTK/CCND1/CCND2/CCND3/CDK12/CDK4/CDK6/CDKN2A/CDKN2B/CHEK1/CHEK2/CSF1R/CTNNB1/DDR2/EGFR/ERBB2/ERBB3/ERBB4/ESR1/EZH2/FANCL/FBXW7/FGFR1/FGFR2/FGFR3/FGFR4/FLT3/GNA11/GNAQ/HRAS/IDH1/IDH2/JAK1/JAK2/JAK3/KDR/KIT/KRAS/MAP2K1/MAP2K2/MET/MPL/MTOR/MYCN/MYD88/MDM2/MDM4/NF1/NF2/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PDGFRB/PIK3CA/PTCH1/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RAF1/RB1/RET/ROS1/SMAD4/SMARCB1/SMO/STK11/TERT/TP53/TSC1/TSC2/VHL/PPP2R2A/ARID1A/ATR/ATRX/BAP1/BLM/FANCA/FANCC/FANCD2/FANCE/FANCF/FANCG/FANCI/MDC1/MRE11/NBN/RAD50/RAD51/XRCC2/MSH2/MSH6/MLH1/PMS2/EPCAM/AXIN1/B2M/KEAP1/ERCC4/POLE/ARID1B/ARID2/EPHA3/EPHA5/EPHA7/POLD1/LRP1B/NOTCH1/NOTCH2/NOTCH3/BMPR1A/CDC73/CDH1/CEBPA/ERCC3/ERCC5/FH/FLCN/GATA2/HOXB13/MAX/MEN1/MITF/MSH3/MUTYH/PHOX2B/PMS1/PRKAR1A/PTPN11/RIT1/RNF43/SBDS/SDHA/SDHAF2/SDHB/SDHC/SDHD/SLX4/SOS1/SUFU/TMEM127/FANCB/ABCB9/ABCC2/ABCC4/ABCG2/ABRAXAS1/ACE2/ACVR1/ACVR1B/ACVR2A/ACYP2/ADGRA2/AGO2/ALOX12B/AMER1/ANKRD11/AR/ARFRP1/ARID5B/ASXL1/ASXL2/ATIC/AURKA/AURKB/AXIN2/AXL/BABAM1/BBC3/BCL10/BCL2/BCL2L1/BCL2L2/BCL6/BCOR/BCORL1/BCR/BIRC3/BIRC5/BLK/BRD4/BTG1/C8orf34/CALR/CANX/CARD11/CARM1/CASP8/CBFB/CBL/CBR3/CCN6/CCNE1/CCNQ/CD19/CD200/CD22/CD274/CD276/CD38/CD3D/CD3E/CD3G/CD40/CD52/CD74/CD79A/CD79B/CDC42/CDK2/CDK8/CDK9/CDKN1A/CDKN1B/CDKN2C/CENPA/CHD4/CHST3/CIC/COL5A1/COP1/CREBBP/CRKL/CRLF2/CSDE1/CSF3R/CSK/CSNK1A1/CTCF/CTLA4/CTNNA1/CTSB/CTSL/CTSS/CUL3/CUL4A/CXCR4/CYLD/CYP17A1/CYP1A1/CYP1B1/CYP2C19/CYP2E1/CYP4B1/CYSLTR2/DAXX/DCUN1D1/DDR1/DHFR/DICER1/DIS3/DMD/DNAJB1/DNMT1/DNMT3A/DNMT3B/DOT1L/DROSHA/DSCAM/DUSP4/E2F3/EED/EGF/EGFL7/EIF1AX/EIF4A2/EIF4E/ELF3/ELOC/EML4/EMSY/EP300/EPAS1/EPHA2/EPHB1/ERAP1/ERAP2/ERF/ERG/ERRFI1/ETV1/ETV4/ETV5/ETV6/EWSR1/EZH1/EZR/FANCM/FAS/FASTKD3/FAT1/FCGR3A/FGF1/FGF10/FGF12/FGF14/FGF19/FGF2/FGF23/FGF3/FGF4/FGF5/FGF6/FGF7/FGF8/FGF9/FGR/FLT1/FLT4/FOXA1/FOXL2/FOXO1/FOXP1/FRK/FRS2/FUBP1/FYN/GABRA6/GALNT14/GATA1/GATA3/GATA4/GATA6/GEN1/GID4/GLI1/GNA13/GNAS/GPS2/GREM1/GRIN2A/GRM3/GSK3B/H1-2/H2BC5/H3-3A/H3-3B/H3-4/H3-5/H3C1/H3C10/H3C11/H3C12/H3C13/H3C14/H3C2/H3C3/H3C4/H3C6/H3C7/H3C8/HAS3/HDAC2/HGF/HLA-A/HLA-B/HNF1A/HSD3B1/HSP90AA1/ICOSLG/ID3/IDE/IFI30/IFNGR1/IGF1/IGF1R/IGF2/IKBKE/IKZF1/IL10/IL2RA/IL2RB/IL2RG/IL6/IL7R/INHA/INHBA/INPP4A/INPP4B/INPPL1/INSR/IRF2/IRF4/IRS1/IRS2/ITK/JUN/KAT6A/KCNJ5/KDM5A/KDM5C/KDM6A/KEL/KLC3/KLF4/KLHL6/KMT2A/KMT2B/KMT2C/KMT2D/KMT5A/KNSTRN/LATS1/LATS2/LCK/LGMN/LIMK1/LMO1/LNPEP/LRIG3/LRP2/LTK/LYN/MALT1/MAP2K4/MAP2K7/MAP3K1/MAP3K13/MAP3K14/MAP4K5/MAPK1/MAPK3/MAPKAP1/MCL1/MED12/MEF2B/MERTK/MGA/MLH3/MSI1/MSI2/MST1/MST1R/MTR/MTRR/MYB/MYC/MYCL/MYOD1/NCOA3/NCOR1/NEGR1/NFE2L2/NFKBIA/NKX2-1/NKX3-1/NOS3/NOTCH4/NPEPPS/NPM1/NRDC/NRG1/NSD1/NSD2/NSD3/NT5C2/NTHL1/NUF2/NUP93/NUTM1/PAK1/PAK3/PAK5/PARP1/PARP2/PAX5/PBRM1/PCBP1/PCNA/PDCD1/PDCD1LG2/PDIA3/PDK1/PDPK1/PGR/PHF6/PIK3C2B/PIK3C2G/PIK3C3/PIK3CB/PIK3CD/PIK3CG/PIK3R1/PIK3R2/PIK3R3/PIM1/PLCG2/PLK2/PMAIP1/PNPLA3/PNRC1/POLB/POLR1G/PPARG/PPM1D/PPP2R1A/PPP4R2/PPP6C/PRDM1/PRDM14/PREX2/PRKCI/PRKD1/PRKDC/PRKN/PTGS2/PTK2/PTK6/PTP4A1/PTPRD/PTPRS/PTPRT/QKI/RAB35/RAC1/RAC2/RAD21/RAD52/RANBP2/RARA/RASA1/RBM10/RECQL/RECQL4/REL/RHEB/RHOA/RICTOR/RNU6-28P/ROCK1/RPL13/RPS6KA4/RPS6KB2/RPTOR/RRAGC/RRAS/RRAS2/RRM1/RSPO2/RTEL1/RUNX1/RXRA/RYBP/SCG5/SDC4/SEMA3C/SESN1/SESN2/SESN3/SETD2/SF3B1/SGK1/SH2B3/SH2D1A/SHOC2/SHQ1/SIK1/SLAMF7/SLC19A1/SLC22A2/SLC28A3/SLC34A2/SLCO1B1/SLCO1B3/SMAD2/SMAD3/SMARCA4/SMARCD1/SMYD3/SNCAIP/SOCS1/SOX10/SOX2/SOX17/SOX9/SPEN/SPOP/SPRED1/SPRY2/SRC/SRD5A2/SRMS/SRSF2/STAG2/STAT3/STAT4/STAT5A/STAT5B/STIM1/STK19/STK40/SUZ12/SYK/TAP1/TAP2/TAPBP/TAPBPL/TBX3/TCF3/TCF7L2/TEK/TENT5C/TERT/TET1/TET2/TGFBR1/TGFBR2/TIPARP/TMPRSS2/TNF/TNFAIP3/TNFRSF14/TNFRSF8/TNFSF11/TOP1/TP53BP1/TP63/TP73/TPP2/TRAF2/TRAF7/TSHR/TSPAN31/TUBB1/TYK2/TYRO3/U2AF1/UMPS/UPF1/VEGFA/VSIR/VTCN1/WAS/WT1/WWTR1/XIAP/XPO1/YAP1/YES1/ZFHX3/ZNF217/ZNF703,MET,TERT,CDK4/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/FLT3/MET/MYCN/MDM2/MDM4/CDKN2A/CDKN2B,ALK/BRAF/FGFR1/FGFR2/FGFR3/NTRK1/NTRK2/NTRK3/RET/ROS1,BCL2L11,ABCB1/CDA/CYP19A1/CYP2B6/CYP2C8/CYP2D6/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/NUDT15/SOD2/TPMT/TYMS/UGT1A1/XPC/XRCC1/CCND1,ALK/APC/ASXL1/ATM/ATRX/BAP1/BLM/BMPR1A/BRAF/BRCA1/BRCA2/BRIP1/CBL/CDC73/CDH1/CDK4/CDKN1B/CDKN2A/CEBPA/CHEK2/CREBBP/CTLA4/DICER1/DNMT3A/EGFR/EP300/EPCAM/ERCC4/ETV6/FANCA/FANCC/FANCD2/FANCE/FANCF/FANCG/FANCI/FANCL/FAS/FH/FLCN/GATA2/HOXB13/HRAS/IKZF1/KRAS/MAP2K1/MAP2K2/MAX/MEN1/MET/MITF/MLH1/MSH2/MSH3/MSH6/MUTYH/NBN/NF1/NF2/NKX2-1/NRAS/NTHL1/PALB2/PAX5/PHOX2B/PMS2/POLD1/POLE/PRKAR1A/PTCH1/PTEN/PTPN11/RAD51/RAD51C/RAD51D/RAF1/RB1/RET/RIT1/RNF43/RRAS2/RUNX1/SBDS/SDHA/SDHAF2/SDHB/SDHC/SDHD/SLX4/SMAD4/SMARCA4/SMARCB1/SOS1/STAT3/STK11/SUFU/TERT/TMEM127/TP53/TSC1/TSC2/VHL/WT1/XRCC2,MSH2/MSH6/MLH1/PMS2/EPCAM,ATM/ATR/BARD1/BRCA1/BRCA2/BRIP1/CDK12/CHEK1/CHEK2/FANCA/FANCL/MLH1/NBN/PALB2/RAD51B/RAD51C/RAD51D/RAD54L,ARID1A/FANCM/HDAC2/POLD1/PTEN/RAD50/PPP2R2A/ATR/ATRX/BAP1/BLM/FANCA/FANCC/FANCD2/FANCE/FANCF/FANCG/FANCI/MDC1/MRE11/NBN/RAD51/XRCC2/ARID1B/ARID2/EMSY/RAD52,MDM2/MDM4/EGFR/JAK1/JAK2/CTNNB1/AXIN1/APC/ALK/B2M/PTEN/STK11/KEAP1/ATM/ATR/BRCA1/BRCA2/CHEK1/CHEK2/BAP1/ERCC4/POLE/PALB2/RAD51C/RAD51D/ARID1A/ARID1B/ARID2/EPHA3/EPHA5/EPHA7/NF1/POLD1/LRP1B/NOTCH1/NOTCH2/NOTCH3 +LZ113,624gene,肿瘤624基因检测(血液版),肿瘤精准诊疗基因检测(624基因),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo;addHrr1;addHrr2;addHcs;addbigPanel;addTmb,NA,624,ABL1/AKT1/AKT2/AKT3/ALK/APC/ARAF/ATM/BARD1/BCL2L11/BRAF/BRCA1/BRCA2/BRIP1/BTK/CCND1/CCND2/CCND3/CCNE1/CDK12/CDK4/CDKN2A/CDKN2B/CHEK1/CHEK2/CSF1R/CSF3R/CTNNB1/CXCR4/DDR2/EGFR/ERBB2/ERBB3/ERBB4/ESR1/EZH2/FANCL/FBXW7/FGFR1/FGFR2/FGFR3/FGFR4/FLT3/GNA11/GNAQ/HRAS/IDH1/IDH2/JAK1/JAK2/JAK3/KDR/KIT/KRAS/MAP2K1/MAP2K2/MDM2/MET/MPL/MTOR/MYCN/MYD88/NF1/NF2/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PDGFRB/PIK3CA/PPP2R2A/PTCH1/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RAF1/RB1/RET/ROS1/SMAD4/SMARCB1/SMO/STK11/TP53/TSC1/TSC2/VHL/ARID1A/ARID1B/ARID2/ATR/ATRX/BAP1/BLM/EMSY/FANCA/FANCC/FANCD2/FANCE/FANCG/FANCM/HDAC2/MRE11/NBN/POLD1/RAD50/RAD51/RAD52/WRN/XRCC2/MLH1/MSH2/MSH6/PMS2/EPCAM/AXIN1/B2M/CD274/EPHA3/ERCC4/FGF19/FGF3/FGF4/KEAP1/MDM4/MTAP/NFE2L2/NOTCH1/NOTCH2/POLE/RNF43/SETD2/ASXL1/CBL/CDC73/CDH1/CDKN1B/CEBPA/CREBBP/DNMT3A/EP300/ERCC3/FAS/FH/FLCN/IKZF1/MAPK1/MEN1/MITF/NKX2-1/PAX5/PRKAR1A/PTPN11/SDHA/SDHB/SDHC/SDHD/SMARCA4/STAT3/SUFU/TERC/WT1/ABL2/ACSL6/ACVR1/ACVR1B/ACVR2A/AFDN/AFF1/AFF3/AKAP9/ALDH2/ALOX12B/AMER1/AR/ARFRP1/ARHGAP5/ARHGEF12/ASXL2/ATP1A1/ATP2B3/AURKA/AURKB/AXIN2/AXL/B3GALT2/BAX/BCL11A/BCL2/BCL2L1/BCL2L12/BCL2L2/BCL3/BCL6/BCL9/BCL9L/BCLAF1/BCOR/BCORL1/BCR/BIRC6/BMP5/BMPR1A/BRD3/BRD4/BTG1/BTG2/BUB1B/CALR/CAMTA1/CARD11/CASP8/CASP9/CBFB/CCDC6/CCR4/CD209/CD22/CD70/CD74/CD79A/CD79B/CDH10/CDH11/CDK8/CDKN1A/CDKN2C/CDX2/CEP43/CEP89/CHD2/CHD4/CIC/CIITA/CLIP1/CLTC/CLTCL1/CNBD1/CNTNAP2/CNTRL/COL1A1/COL2A1/CRKL/CRLF2/CRNKL1/CRTC1/CSMD3/CTCF/CTNNA1/CTNND1/CTNND2/CUL4A/CUX1/CYLD/CYP17A1/DAXX/DCBLD1/DCC/DDB2/DDR1/DDX10/DDX5/DDX6/DGCR8/DICER1/DIS3/DNM2/DNMT1/DOT1L/DROSHA/EBF1/EED/ELL/EML4/EPHA7/EPHB1/EPHB4/EPS15/ERCC5/ERG/ERRFI1/ETV1/ETV6/EVI2A/EVI2B/EXT2/EZR/FAM135B/FAM47C/FAT1/FAT3/FAT4/FBXO11/FCGR2B/FES/FGF10/FGF12/FGF14/FGF23/FGF6/FHIT/FKBP9/FLNA/FLT1/FLT4/FOXA1/FOXL2/FOXO3/FOXP1/FUBP1/GABRA6/GAS7/GATA1/GATA2/GATA3/GATA4/GATA6/GID4/GLI1/GNA13/GNAS/GRIN2A/GRM3/GSK3B/GSTTP2/H3-3A/H3C2/H4C9/HDAC1/HERPUD1/HGF/HIF1A/HIF1A-AS3/HIP1/HLA-A/HLA-B/HLA-C/HMGA1/HNF1A/HNRNPA2B1/HOXA11/HSP90AA1/HSP90AB1/ID3/IGF1R/IKBKE/IL6ST/IL7R/INPP4B/IRF2/IRF4/IRS2/IRS4/ISX/ITGAV/ITK/JUN/KAT6A/KAT6B/KAT7/KCNJ5/KDM5A/KDM5C/KDM6A/KEL/KIAA1549/KLF4/KLHL6/KMT2A/KMT2C/KMT2D/KNL1/KNSTRN/KTN1/LARP4B/LATS1/LATS2/LHFPL6/LMNA/LMO1/LMO2/LOC101928140/LOC645967/LPP/LRIG3/LRP1B/LRRC4/LSM14A/LTK/LYN/LZTR1/MACC1/MAF/MAP2K4/MAP3K13/MAX/MB21D2/MCL1/MECOM/MED12/MEF2B/MERTK/MKNK1/MLH3/MLLT3/MSI2/MSN/MST1R/MUC1/MUC16/MUC4/MYB/MYC/MYCL/MYH11/MYOD1/N4BP2/NAB2/NACA/NBEA/NCOA2/NCOR1/NCOR2/NDRG1/NFATC2/NFKB2/NFKBIA/NFKBIE/NIN/NOTCH3/NPIPB2/NPM1/NRG1/NSD1/NSD2/NSD3/NUMA1/NUP214/NUTM2B/OLIG2/P2RY8/PABPC1/PARP1/PARP2/PARP3/PAX3/PBRM1/PCBP1/PCM1/PDCD1/PDCD1LG2/PDE4DIP/PDK1/PER1/PIK3C2B/PIK3C2G/PIK3CB/PIK3R1/PIM1/PLCG1/PMS1/POLQ/PPARG/PPFIBP1/PPM1D/PPP2R1A/PPP6C/PRCC/PRDM1/PRDM2/PREX2/PRKACA/PRKCB/PRKCI/PRKN/PTPN13/PTPN6/PTPRB/PTPRC/PTPRD/PTPRO/PTPRT/QKI/RABEP1/RAC1/RAD21/RANBP2/RARA/RBM10/RBM15/RECQL4/REL/RGPD3/RGS7/RHOA/RICTOR/RIT1/RNF213/ROBO2/RPL10/RPL22/RPL5/RPTOR/RUNX1/RUNX1T1/SALL4/SDC4/SEPTIN9/SETBP1/SETD1B/SETDB1/SF3B1/SGK1/SH2B3/SHTN1/SIRPA/SIX1/SIX2/SLC34A2/SMAD2/SMAD3/SMARCE1/SMC1A/SNCAIP/SNX29/SOCS1/SOX2/SOX9/SPECC1/SPEN/SPOP/SRC/SRSF2/SS18/SSX1/STAG1/STAG2/STAT5B/STAT6/STIL/SYK/TAL2/TAP1/TAP2/TBL1XR1/TBX3/TCEA1/TCF3/TCF7L2/TEC/TEK/TENT5C/TERT/TET1/TET2/TFE3/TFG/THRAP3/TIPARP/TMPRSS2/TNC/TNFAIP3/TNFRSF14/TNFRSF17/TP63/TPR/TRAF7/TRIM24/TRIM33/TRIP11/TRRAP/TSHR/TYRO3/U2AF1/UBR5/USP6/USP8/VEGFA/WAS/WNK2/XPO1/ZEB1/ZFHX3/ZMYM2/ZMYM3/ZNF217/ZNF479/ZNF703/ZNRF3/ZRSR2/TERT,MET,TERT,ALK/ATM/B2M/CCND1/CCND2/CCND3/CCNE1/CD274/CDK4/CDKN2A/CDKN2B/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/FLT3/MDM2/MDM4/MET/MYCN/NF2/PTEN/RB1/SMARCB1,ALK/BRAF/FGFR1/FGFR2/FGFR3/MET/NTRK1/NTRK2/NTRK3/PDGFRA/RET/ROS1,BCL2L11,ABCB1/ABCG2/ACYP2/CASP7/CDA/CEP72/CYP19A1/CYP2B6/CYP2D6/CYP3A4/DHFR/DPYD/ERCC1/ERCC2/GSTP1/HAS3/MTHFR/MUTYH/NQO1/NUDT15/PNPLA3/RRM1/SLCO1B1/SLCO1B3/SOD2/TP53/TPMT/TYMS/UGT1A1/XRCC1,ALK/APC/ASXL1/ATM/ATRX/BAP1/BLM/BMPR1A/BRAF/BRCA1/BRCA2/BRIP1/CBL/CDC73/CDH1/CDK4/CDKN1B/CDKN2A/CEBPA/CHEK2/CREBBP/DICER1/DNMT3A/EGFR/EP300/EPCAM/ERCC3/ERCC4/ETV6/FANCA/FANCC/FANCD2/FANCE/FANCG/FANCL/FANCM/FAS/FH/FLCN/GATA2/HRAS/IKZF1/KRAS/LZTR1/MAP2K1/MAP2K2/MAPK1/MEN1/MET/MITF/MLH1/MSH2/MSH3/MSH6/MUTYH/NBN/NF1/NF2/NKX2-1/NRAS/PALB2/PAX5/PMS2/POLD1/POLE/PRKAR1A/PTCH1/PTEN/PTPN11/RAD51/RAD51C/RAD51D/RAF1/RB1/RET/RNF43/RUNX1/SDHA/SDHB/SDHC/SDHD/SMAD4/SMARCA4/SMARCB1/STAT3/STK11/SUFU/TERC/TP53/TSC1/TSC2/VHL/WRN/WT1/XRCC2,MSH2/MSH6/MLH1/PMS2/EPCAM,ATM/ATR/BARD1/BRCA1/BRCA2/BRIP1/CDK12/CHEK1/CHEK2/FANCA/FANCL/MLH1/NBN/PALB2/RAD51B/RAD51C/RAD51D/RAD54L,ARID1A/FANCM/HDAC2/POLD1/PTEN/RAD50/PPP2R2A/ATR/ATRX/BAP1/BLM/FANCA/FANCC/FANCD2/FANCE/FANCG/MRE11/NBN/RAD51/XRCC2/ARID1B/ARID2/EMSY/RAD52/WRN,CCND1/ALK/APC/ARID1A/ATM/ATR/AXIN1/B2M/BAP1/BRCA1/BRCA2/BRIP1/CD274/CDK12/CDKN2A/CDKN2B/CHEK1/CHEK2/CTNNB1/EGFR/EPHA3/ERCC4/FGF19/FGF3/FGF4/JAK1/JAK2/KEAP1/MDM2/MDM4/MRE11/MTAP/NBN/NF1/NFE2L2/NOTCH1/NOTCH2/NTRK3/PALB2/POLD1/POLE/PTEN/RAD50/RAD51C/RAD51D/RNF43/SETD2/SMO/STK11 LZ102,lung_17_gene,肺癌17基因检测(组织版),肺癌17基因检测报告(组织版),addTarget;addFusion;addCnv,ST21,17,ALK/AKT1/BRAF/EGFR/ERBB2/KRAS/MAP2K1/MET/PIK3CA/PTEN/NTRK1/NTRK2/NTRK3/NRAS,MET,NA,EGFR/ERBB2/MET,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,BCL2L11,NA,NA,NA,NA,NA,NA LZ111,lung_17_gene,肺癌17基因检测(血液版),肺癌17基因检测报告(血液版),addTarget;addFusion;addCnv,ST21,17,ALK/AKT1/BRAF/EGFR/ERBB2/KRAS/MAP2K1/MET/PIK3CA/PTEN/NTRK1/NTRK2/NTRK3/NRAS,MET,NA,EGFR/ERBB2/MET,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,BCL2L11,NA,NA,NA,NA,NA,NA -LZ135,lung_85_gene,肺癌85基因检测(组织版),肺癌85基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo,ST21,160,AKT1/ALK/ATM/BARD1/BCL2L11/BRAF/BRCA1/BRCA2/BRIP1/CCND1/CCND2/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/DDR2/EGFR/ERBB2/ERBB4/FANCL/FBXW7/FGFR1/FGFR2/FGFR3/HRAS/IDH1/KIT/KRAS/MET/MTOR/MYC/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RET/ROS1/TP53/TSC1/TSC2/VHL/STK11/APC/ARID1A/CTNNB1/EPCAM/ERBB3/MAP2K1/MLH1/MSH2/MSH6/PMS2/RB1/SMAD4/SMO,MET,NA,ALK/CCND1/CCND2/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/MYC/SMO,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,BCL2L11,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ136,lung_85_gene,肺癌85基因检测(血液版),肺癌85基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr;addChemo,ST21,160,AKT1/ALK/ATM/BARD1/BCL2L11/BRAF/BRCA1/BRCA2/BRIP1/CCND1/CCND2/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/DDR2/EGFR/ERBB2/ERBB4/FANCL/FBXW7/FGFR1/FGFR2/FGFR3/HRAS/IDH1/KIT/KRAS/MET/MTOR/MYC/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RET/ROS1/TP53/TSC1/TSC2/VHL/STK11/APC/ARID1A/CTNNB1/EPCAM/ERBB3/MAP2K1/MLH1/MSH2/MSH6/PMS2/RB1/SMAD4/SMO,MET,NA,ALK/CCND1/CCND2/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/MYC/SMO,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,BCL2L11,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ137,Colorectal_88_gene,结直肠癌88基因检测(组织版),结直肠癌88基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo;addHcs,ST14,160,AKT1/ALK/APC/ARID1A/ATM/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/CTNNB1/EGFR/EPCAM/ERBB2/FANCL/FBXW7/FGFR1/FGFR2/FGFR3/FLT3/IDH1/KDR/KIT/KRAS/MAP2K1/MET/MLH1/MSH2/MSH6/MTOR/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PMS2/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SMAD4/SMO/TP53/TSC1/TSC2/VHL/POLD1/POLE/STK11/MUTYH/SDHA/SDHB/SDHC/SDHD,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/FLT3/MET/PTEN/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,MLH1/MSH2/MSH6/PMS2/EPCAM/TP53/APC/MUTYH/SMAD4/STK11/PTEN,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ138,Colorectal_88_gene,结直肠癌88基因检测(血液版),结直肠癌88基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr;addChemo;addHcs,ST14,160,AKT1/ALK/APC/ARID1A/ATM/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/CTNNB1/EGFR/EPCAM/ERBB2/FANCL/FBXW7/FGFR1/FGFR2/FGFR3/FLT3/IDH1/KDR/KIT/KRAS/MAP2K1/MET/MLH1/MSH2/MSH6/MTOR/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PMS2/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SMAD4/SMO/TP53/TSC1/TSC2/VHL/POLD1/POLE/STK11/MUTYH/SDHA/SDHB/SDHC/SDHD,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/FLT3/MET/PTEN/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,MLH1/MSH2/MSH6/PMS2/EPCAM/TP53/APC/MUTYH/SMAD4/STK11/PTEN,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ160,Gastric_86_gene,胃癌86基因检测(组织版),胃癌86基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo;addHcs,ST3001,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/APC/ARID1A/CDH1/CTNNB1/ERBB4/ERBB3/SMAD4/STK11/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,APC/CDH1/EPCAM/MLH1/MSH2/MSH6/PMS2/SMAD4/STK11,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ161,Gastric_86_gene,胃癌86基因检测(血液版),胃癌86基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr;addChemo;addHcs,ST3001,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/APC/ARID1A/CDH1/CTNNB1/ERBB4/ERBB3/SMAD4/STK11/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,APC/CDH1/EPCAM/MLH1/MSH2/MSH6/PMS2/SMAD4/STK11,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ164,Esophagea_83_gene,食管癌83基因检测(组织版),食管癌83基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo;addHcs,ST3004,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/NOTCH1/ERBB4/ERBB3/MDM2/MYC/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,FANCA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ165,Esophagea_83_gene,食管癌83基因检测(血液版),食管癌83基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr;addChemo;addHcs,ST3004,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/NOTCH1/ERBB4/ERBB3/MDM2/MYC/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,FANCA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ166,Breast_85_gene,乳腺癌85基因检测(组织版),乳腺癌85基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo;addHcs,ST07,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/STK11/CDH1/GATA3/ERBB4/ARID1A/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/PTEN,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3/CYP19A1/CYP2D6,BRCA1/BRCA2/CDH1/PALB2/PTEN/TP53,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ167,Breast_85_gene,乳腺癌85基因检测(血液版),乳腺癌85基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr;addChemo;addHcs,ST07,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/STK11/CDH1/GATA3/ERBB4/ARID1A/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/PTEN,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3/CYP19A1/CYP2D6,BRCA1/BRCA2/CDH1/PALB2/PTEN/TP53,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ168,Ovarian_87_gene,卵巢癌87基因检测(组织版),卵巢癌87基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo;addHcs,ST01,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/CCND1/HRAS/MAP2K1/ARID1A/CTNNB1/ERBB4/MDM2/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2/CCND1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3/CYP19A1/CYP2D6,BRCA1/BRCA2/EPCAM/MLH1/MSH2/MSH6/PMS2,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ169,Ovarian_87_gene,卵巢癌87基因检测(血液版),卵巢癌87基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr;addChemo;addHcs,ST01,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/CCND1/HRAS/MAP2K1/ARID1A/CTNNB1/ERBB4/MDM2/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2/CCND1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3/CYP19A1/CYP2D6,BRCA1/BRCA2/EPCAM/MLH1/MSH2/MSH6/PMS2,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ170,Cervical_84_gene,宫颈癌84基因检测(组织版),宫颈癌84基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo,ST12,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/FBXW7/ARID1A/STK11/NOTCH1/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3/CYP19A1/CYP2D6,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ171,Cervical_84_gene,宫颈癌84基因检测(血液版),宫颈癌84基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr;addChemo,ST12,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/FBXW7/ARID1A/STK11/NOTCH1/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3/CYP19A1/CYP2D6,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ172,Uterine_84_gene,子宫内膜癌84基因检测(组织版),子宫内膜癌84基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo;addHcs,ST23,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/CTNNB1/ARID1A/POLE/FBXW7/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3/CYP19A1/CYP2D6,EPCAM/MLH1/MSH2/MSH6/PMS2,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ173,Uterine_84_gene,子宫内膜癌84基因检测(血液版),子宫内膜癌84基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr;addChemo;addHcs,ST23,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/CTNNB1/ARID1A/POLE/FBXW7/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3/CYP19A1/CYP2D6,EPCAM/MLH1/MSH2/MSH6/PMS2,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ174,Liver_83_gene,肝癌83基因检测(组织版),肝癌83基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo,ST26,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/CTNNB1/ERBB4/TERT/ARID1A/JAK1/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,TERT,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ175,Liver_83_gene,肝癌83基因检测(血液版),肝癌83基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr;addChemo,ST26,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/CTNNB1/ERBB4/TERT/ARID1A/JAK1/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,TERT,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ176,Biliary_84_gene,胆系肿瘤84基因检测(组织版),胆道癌84基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo,ST06,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/MDM2/ARID1A/SMAD4/CTNNB1/APC/FBXW7/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ177,Biliary_84_gene,胆系肿瘤84基因检测(血液版),胆道癌84基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr;addChemo,ST06,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/MDM2/ARID1A/SMAD4/CTNNB1/APC/FBXW7/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ178,Pancreatic_85_gene,胰腺癌85基因检测(组织版),胰腺癌85基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo;addHcs,ST05,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/MDM2/STK11/SMAD4/ERBB4/CTNNB1/VHL/ERBB3/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,ATM/BRCA1/BRCA2/CDKN2A/EPCAM/MLH1/MSH2/MSH6/PALB2/PMS2/STK11/TP53,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ179,Pancreatic_85_gene,胰腺癌85基因检测(血液版),胰腺癌85基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr;addChemo;addHcs,ST05,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/MDM2/STK11/SMAD4/ERBB4/CTNNB1/VHL/ERBB3/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,ATM/BRCA1/BRCA2/CDKN2A/EPCAM/MLH1/MSH2/MSH6/PALB2/PMS2/STK11/TP53,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ180,Prostate_84_gene,前列腺癌84基因检测(组织版),前列腺癌84基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo;addHcs,ST20,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/AR/MYC/ERBB4/APC/SMAD4/STK11/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MYC/PTEN,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,ATM/BRCA1/BRCA2/CHEK2/EPCAM/MLH1/MSH2/MSH6/PALB2/PMS2,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ181,Prostate_84_gene,前列腺癌84基因检测(血液版),前列腺癌84基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr;addChemo;addHcs,ST20,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/AR/MYC/ERBB4/APC/SMAD4/STK11/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MYC/PTEN,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,ATM/BRCA1/BRCA2/CHEK2/EPCAM/MLH1/MSH2/MSH6/PALB2/PMS2,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ182,Urothelial_84_gene,膀胱癌84基因检测(组织版),膀胱癌84基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo,ST17,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/HRAS/ERBB3/MDM2/ARID1A/TERT/CD274/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,TERT,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ183,Urothelial_84_gene,膀胱癌84基因检测(血液版),膀胱癌84基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr;addChemo,ST17,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/HRAS/ERBB3/MDM2/ARID1A/TERT/CD274/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,TERT,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ184,Renal_84_gene,肾癌84基因检测(组织版),肾癌84基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo;addHcs,ST29,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/VHL/CCND1/CTNNB1/ERBB4/ARID1A/FBXW7/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/CCND1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,MET/PTEN/TSC1/TSC2/VHL/SDHA/SDHB/SDHC/SDHD,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ185,Renal_84_gene,肾癌84基因检测(血液版),肾癌84基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr;addChemo;addHcs,ST29,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/VHL/CCND1/CTNNB1/ERBB4/ARID1A/FBXW7/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/CCND1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,MET/PTEN/TSC1/TSC2/VHL/SDHA/SDHB/SDHC/SDHD,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ186,Thyroid_84_gene,甲状腺癌84基因检测(组织版),甲状腺癌84基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo;addHcs,ST03,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/HRAS/NOTCH1/APC/TERT/CCND1/CD274/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,TERT,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/CCND1/PTEN,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,APC/RET,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ187,Thyroid_84_gene,甲状腺癌84基因检测(血液版),甲状腺癌84基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr;addChemo;addHcs,ST03,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/HRAS/NOTCH1/APC/TERT/CCND1/CD274/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,TERT,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/CCND1/PTEN,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,APC/RET,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ188,Melanoma_89_gene,黑色素瘤89基因检测(组织版),黑色素瘤89基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo;addHcs,ST1615,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/GNAQ/MAP2K1/GNA11/ERBB4/CD274/CCND1/JAK2/B2M/CTNNB1/ERBB3/JAK1/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/BRAF,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,BRCA1/BRCA2/CDK4/CDKN2A/PTEN,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ189,Melanoma_89_gene,黑色素瘤89基因检测(血液版),黑色素瘤89基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr;addChemo;addHcs,ST1615,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/GNAQ/MAP2K1/GNA11/ERBB4/CD274/CCND1/JAK2/B2M/CTNNB1/ERBB3/JAK1/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/BRAF,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,BRCA1/BRCA2/CDK4/CDKN2A/PTEN,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ192,Gastrointestinal Stromal Tumor_67_gene,胃肠道间质瘤67基因检测(组织版),胃肠道间质瘤67基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr,ST0225,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/NOTCH1/ARID1A/APC/STK11/SMAD4/ERBB4/ERBB3/FBXW7/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,NA,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ193,Gastrointestinal Stromal Tumor_67_gene,胃肠道间质瘤67基因检测(血液版),胃肠道间质瘤67基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr,ST0225,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/NOTCH1/ARID1A/APC/STK11/SMAD4/ERBB4/ERBB3/FBXW7/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,NA,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ190,Head And Neck_86_gene,头颈部肿瘤86基因检测(组织版),头颈癌86基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;addMmr;addChemo,ST08,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/ERBB4/HRAS/AR/CCND1/NOTCH1/DDR2/SMAD4/ERBB3/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/CCND1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA -LZ191,Head And Neck_86_gene,头颈部肿瘤86基因检测(血液版),头颈癌86基因检测报告(血液版),addTarget;addFusion;addCnv;addMmr;addChemo,ST08,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/ERBB4/HRAS/AR/CCND1/NOTCH1/DDR2/SMAD4/ERBB3/CCND2/CCND3/CDK4/RB1/MSH2/MSH6/PMS2/EPCAM,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/CCND1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ135,lung_85_gene,肺癌85基因检测(组织版),肺癌85基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo,ST21,160,AKT1/ALK/ATM/BARD1/BCL2L11/BRAF/BRCA1/BRCA2/BRIP1/CCND1/CCND2/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/DDR2/EGFR/ERBB2/ERBB4/FANCL/FBXW7/FGFR1/FGFR2/FGFR3/HRAS/IDH1/KIT/KRAS/MET/MTOR/MYC/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RET/ROS1/TP53/TSC1/TSC2/VHL/STK11/APC/ARID1A/CTNNB1/EPCAM/ERBB3/MAP2K1/MLH1/MSH2/MSH6/PMS2/RB1/SMAD4/SMO,MET,NA,ALK/CCND1/CCND2/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/MYC/SMO,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,BCL2L11,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ136,lung_85_gene,肺癌85基因检测(血液版),肺癌85基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr;addChemo,ST21,160,AKT1/ALK/ATM/BARD1/BCL2L11/BRAF/BRCA1/BRCA2/BRIP1/CCND1/CCND2/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/DDR2/EGFR/ERBB2/ERBB4/FANCL/FBXW7/FGFR1/FGFR2/FGFR3/HRAS/IDH1/KIT/KRAS/MET/MTOR/MYC/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RET/ROS1/TP53/TSC1/TSC2/VHL/STK11/APC/ARID1A/CTNNB1/EPCAM/ERBB3/MAP2K1/MLH1/MSH2/MSH6/PMS2/RB1/SMAD4/SMO,MET,NA,ALK/CCND1/CCND2/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/MYC/SMO,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,BCL2L11,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ137,Colorectal_88_gene,结直肠癌88基因检测(组织版),结直肠癌88基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo;addHcs,ST14,160,AKT1/ALK/APC/ARID1A/ATM/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/CTNNB1/EGFR/EPCAM/ERBB2/FANCL/FBXW7/FGFR1/FGFR2/FGFR3/FLT3/IDH1/KDR/KIT/KRAS/MAP2K1/MET/MLH1/MSH2/MSH6/MTOR/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PMS2/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SMAD4/SMO/TP53/TSC1/TSC2/VHL/POLD1/POLE/STK11/MUTYH/SDHA/SDHB/SDHC/SDHD,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/FLT3/MET/PTEN/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,MLH1/MSH2/MSH6/PMS2/EPCAM/TP53/APC/MUTYH/SMAD4/STK11/PTEN,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ138,Colorectal_88_gene,结直肠癌88基因检测(血液版),结直肠癌88基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr;addChemo;addHcs,ST14,160,AKT1/ALK/APC/ARID1A/ATM/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/CTNNB1/EGFR/EPCAM/ERBB2/FANCL/FBXW7/FGFR1/FGFR2/FGFR3/FLT3/IDH1/KDR/KIT/KRAS/MAP2K1/MET/MLH1/MSH2/MSH6/MTOR/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PMS2/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SMAD4/SMO/TP53/TSC1/TSC2/VHL/POLD1/POLE/STK11/MUTYH/SDHA/SDHB/SDHC/SDHD,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/FLT3/MET/PTEN/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,MLH1/MSH2/MSH6/PMS2/EPCAM/TP53/APC/MUTYH/SMAD4/STK11/PTEN,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ160,Gastric_86_gene,胃癌86基因检测(组织版),胃癌86基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo;addHcs,ST3001,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/APC/ARID1A/CDH1/CTNNB1/ERBB4/ERBB3/SMAD4/STK11/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,APC/CDH1/EPCAM/MLH1/MSH2/MSH6/PMS2/SMAD4/STK11,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ161,Gastric_86_gene,胃癌86基因检测(血液版),胃癌86基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr;addChemo;addHcs,ST3001,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/APC/ARID1A/CDH1/CTNNB1/ERBB4/ERBB3/SMAD4/STK11/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,APC/CDH1/EPCAM/MLH1/MSH2/MSH6/PMS2/SMAD4/STK11,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ164,Esophagea_83_gene,食管癌83基因检测(组织版),食管癌83基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo;addHcs,ST3004,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/NOTCH1/ERBB4/ERBB3/MDM2/MYC/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,FANCA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ165,Esophagea_83_gene,食管癌83基因检测(血液版),食管癌83基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr;addChemo;addHcs,ST3004,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/NOTCH1/ERBB4/ERBB3/MDM2/MYC/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,FANCA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ166,Breast_85_gene,乳腺癌85基因检测(组织版),乳腺癌85基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo;addHcs,ST07,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/STK11/CDH1/GATA3/ERBB4/ARID1A/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/PTEN,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3/CYP19A1/CYP2D6,BRCA1/BRCA2/CDH1/PALB2/PTEN/TP53,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ167,Breast_85_gene,乳腺癌85基因检测(血液版),乳腺癌85基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr;addChemo;addHcs,ST07,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/STK11/CDH1/GATA3/ERBB4/ARID1A/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/PTEN,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3/CYP19A1/CYP2D6,BRCA1/BRCA2/CDH1/PALB2/PTEN/TP53,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ168,Ovarian_87_gene,卵巢癌87基因检测(组织版),卵巢癌87基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo;addHcs,ST01,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/CCND1/HRAS/MAP2K1/ARID1A/CTNNB1/ERBB4/MDM2/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2/CCND1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3/CYP19A1/CYP2D6,BRCA1/BRCA2/EPCAM/MLH1/MSH2/MSH6/PMS2,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ169,Ovarian_87_gene,卵巢癌87基因检测(血液版),卵巢癌87基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr;addChemo;addHcs,ST01,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/CCND1/HRAS/MAP2K1/ARID1A/CTNNB1/ERBB4/MDM2/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2/CCND1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3/CYP19A1/CYP2D6,BRCA1/BRCA2/EPCAM/MLH1/MSH2/MSH6/PMS2,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ170,Cervical_84_gene,宫颈癌84基因检测(组织版),宫颈癌84基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo,ST12,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/FBXW7/ARID1A/STK11/NOTCH1/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3/CYP19A1/CYP2D6,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ171,Cervical_84_gene,宫颈癌84基因检测(血液版),宫颈癌84基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr;addChemo,ST12,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/FBXW7/ARID1A/STK11/NOTCH1/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3/CYP19A1/CYP2D6,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ172,Uterine_84_gene,子宫内膜癌84基因检测(组织版),子宫内膜癌84基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo;addHcs,ST23,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/CTNNB1/ARID1A/POLE/FBXW7/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3/CYP19A1/CYP2D6,EPCAM/MLH1/MSH2/MSH6/PMS2,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ173,Uterine_84_gene,子宫内膜癌84基因检测(血液版),子宫内膜癌84基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr;addChemo;addHcs,ST23,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/CTNNB1/ARID1A/POLE/FBXW7/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3/CYP19A1/CYP2D6,EPCAM/MLH1/MSH2/MSH6/PMS2,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ174,Liver_83_gene,肝癌83基因检测(组织版),肝癌83基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo,ST26,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/CTNNB1/ERBB4/tert-p/ARID1A/JAK1/CCND2/CCND3/CDK4/RB1,MET,TERT,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ175,Liver_83_gene,肝癌83基因检测(血液版),肝癌83基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr;addChemo,ST26,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/CTNNB1/ERBB4/tert-p/ARID1A/JAK1/CCND2/CCND3/CDK4/RB1,MET,TERT,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ176,Biliary_84_gene,胆系肿瘤84基因检测(组织版),胆道癌84基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo,ST06,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/MDM2/ARID1A/SMAD4/CTNNB1/APC/FBXW7/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ177,Biliary_84_gene,胆系肿瘤84基因检测(血液版),胆道癌84基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr;addChemo,ST06,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/MDM2/ARID1A/SMAD4/CTNNB1/APC/FBXW7/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ178,Pancreatic_85_gene,胰腺癌85基因检测(组织版),胰腺癌85基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo;addHcs,ST05,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/MDM2/STK11/SMAD4/ERBB4/CTNNB1/VHL/ERBB3/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,ATM/BRCA1/BRCA2/CDKN2A/EPCAM/MLH1/MSH2/MSH6/PALB2/PMS2/STK11/TP53,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ179,Pancreatic_85_gene,胰腺癌85基因检测(血液版),胰腺癌85基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr;addChemo;addHcs,ST05,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/MDM2/STK11/SMAD4/ERBB4/CTNNB1/VHL/ERBB3/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,ATM/BRCA1/BRCA2/CDKN2A/EPCAM/MLH1/MSH2/MSH6/PALB2/PMS2/STK11/TP53,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ180,Prostate_84_gene,前列腺癌84基因检测(组织版),前列腺癌84基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo;addHcs,ST20,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/AR/MYC/ERBB4/APC/SMAD4/STK11/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MYC/PTEN,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,ATM/BRCA1/BRCA2/CHEK2/EPCAM/MLH1/MSH2/MSH6/PALB2/PMS2,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ181,Prostate_84_gene,前列腺癌84基因检测(血液版),前列腺癌84基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr;addChemo;addHcs,ST20,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/AR/MYC/ERBB4/APC/SMAD4/STK11/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MYC/PTEN,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,ATM/BRCA1/BRCA2/CHEK2/EPCAM/MLH1/MSH2/MSH6/PALB2/PMS2,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ182,Urothelial_84_gene,膀胱癌84基因检测(组织版),膀胱癌84基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo,ST17,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/HRAS/ERBB3/MDM2/ARID1A/tert-p/CD274/CCND2/CCND3/CDK4/RB1,MET,TERT,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ183,Urothelial_84_gene,膀胱癌84基因检测(血液版),膀胱癌84基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr;addChemo,ST17,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/HRAS/ERBB3/MDM2/ARID1A/tert-p/CD274/CCND2/CCND3/CDK4/RB1,MET,TERT,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/MDM2,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ184,Renal_84_gene,肾癌84基因检测(组织版),肾癌84基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo;addHcs,ST29,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/VHL/CCND1/CTNNB1/ERBB4/ARID1A/FBXW7/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/CCND1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,MET/PTEN/TSC1/TSC2/VHL/SDHA/SDHB/SDHC/SDHD,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ185,Renal_84_gene,肾癌84基因检测(血液版),肾癌84基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr;addChemo;addHcs,ST29,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/VHL/CCND1/CTNNB1/ERBB4/ARID1A/FBXW7/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/CCND1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,MET/PTEN/TSC1/TSC2/VHL/SDHA/SDHB/SDHC/SDHD,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ186,Thyroid_84_gene,甲状腺癌84基因检测(组织版),甲状腺癌84基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo;addHcs,ST03,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/HRAS/NOTCH1/APC/tert-p/CCND1/CD274/CCND2/CCND3/CDK4/RB1,MET,TERT,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/CCND1/PTEN,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,APC/RET,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ187,Thyroid_84_gene,甲状腺癌84基因检测(血液版),甲状腺癌84基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr;addChemo;addHcs,ST03,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/HRAS/NOTCH1/APC/tert-p/CCND1/CD274/CCND2/CCND3/CDK4/RB1,MET,TERT,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/CCND1/PTEN,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,APC/RET,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ188,Melanoma_89_gene,黑色素瘤89基因检测(组织版),黑色素瘤89基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo;addHcs,ST1615,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/GNAQ/MAP2K1/GNA11/ERBB4/CD274/CCND1/JAK2/B2M/CTNNB1/ERBB3/JAK1/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/BRAF,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,BRCA1/BRCA2/CDK4/CDKN2A/PTEN,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ189,Melanoma_89_gene,黑色素瘤89基因检测(血液版),黑色素瘤89基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr;addChemo;addHcs,ST1615,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/GNAQ/MAP2K1/GNA11/ERBB4/CD274/CCND1/JAK2/B2M/CTNNB1/ERBB3/JAK1/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/BRAF,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,BRCA1/BRCA2/CDK4/CDKN2A/PTEN,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ192,Gastrointestinal Stromal Tumor_67_gene,胃肠道间质瘤67基因检测(组织版),胃肠道间质瘤67基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr,ST0225,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/NOTCH1/ARID1A/APC/STK11/SMAD4/ERBB4/ERBB3/FBXW7/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,NA,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ193,Gastrointestinal Stromal Tumor_67_gene,胃肠道间质瘤67基因检测(血液版),胃肠道间质瘤67基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr,ST0225,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/NOTCH1/ARID1A/APC/STK11/SMAD4/ERBB4/ERBB3/FBXW7/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,NA,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ190,Head And Neck_86_gene,头颈部肿瘤86基因检测(组织版),头颈癌86基因检测报告(组织版),addTarget;addFusion;addCnv;addMsi;assMmr;addChemo,ST08,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/ERBB4/HRAS/AR/CCND1/NOTCH1/DDR2/SMAD4/ERBB3/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/CCND1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA +LZ191,Head And Neck_86_gene,头颈部肿瘤86基因检测(血液版),头颈癌86基因检测报告(血液版),addTarget;addFusion;addCnv;assMmr;addChemo,ST08,160,AKT1/ALK/ATM/ATR/BARD1/BRAF/BRCA1/BRCA2/BRIP1/CCND2/CCND3/CDK12/CDK4/CDKN2A/CHEK1/CHEK2/CSF1R/EGFR/ERBB2/FANCA/FANCL/FGFR1/FGFR2/FGFR3/IDH1/KIT/KRAS/MET/MLH1/MTOR/NBN/NF1/NRAS/NTRK1/NTRK2/NTRK3/PALB2/PDGFRA/PIK3CA/PTEN/RAD51B/RAD51C/RAD51D/RAD54L/RB1/RET/ROS1/SDHA/SDHB/SDHC/SDHD/SMO/TP53/TSC1/TSC2/ERBB4/HRAS/AR/CCND1/NOTCH1/DDR2/SMAD4/ERBB3/CCND2/CCND3/CDK4/RB1,MET,NA,ALK/CCND2/CCND3/CDK4/CDKN2A/CSF1R/EGFR/ERBB2/FGFR1/FGFR2/FGFR3/MET/RB1/CCND1,ALK/NTRK1/NTRK2/NTRK3/RET/ROS1,NA,ABCB1/CASP7/CDA/CYP2C8/CYP3A4/DPYD/DYNC2H1/ERCC1/ERCC2/GSTP1/MTHFR/NQO1/SOD2/TPMT/TYMS/UGT1A1/XRCC1/XPC/HAS3,NA,MSH2/MSH6/MLH1/PMS2/EPCAM,NA,NA,NA diff --git a/pipeline.wdl b/pipeline.wdl index a11a5bf..4307c31 100644 --- a/pipeline.wdl +++ b/pipeline.wdl @@ -1,5 +1,4 @@ -import "./wdl/catecode.wdl" import "./wdl/qc.wdl" import "./wdl/alignment.wdl" import "./wdl/call_mutation.wdl" @@ -12,6 +11,7 @@ import "./wdl/hereditary.wdl" import "./wdl/tmb.wdl" import "./wdl/postprocess.wdl" + workflow pipeline { String tumor @@ -33,10 +33,10 @@ workflow pipeline { Map[String, Boolean] catecode -# call mytask.create_dir as create_dir { -# input: -# workdir=workdir -# } + # call mytask.create_dir as create_dir { + # input: + # workdir=workdir + # } call qc.qc as qc { input: @@ -168,6 +168,17 @@ workflow pipeline { project=project } + call pollution.call_pollution as call_pollution { + input: + name=tumor, + normal=normal, + output_dir=workdir, + probe=probe, + raw_vcf=call_mutation.raw_vcf, + somatic_vcf=call_mutation.somatic_vcf, + germline_vcf=call_mutation.germline_vcf + } + call postprocess.call_postprocess as call_postprocess { input: run=catecode['addAutoReport'], diff --git a/script/chemo.py b/script/chemo.py index a22f8f6..9b7e8d5 100755 --- a/script/chemo.py +++ b/script/chemo.py @@ -225,8 +225,7 @@ class ChemoRun: if __name__ == "__main__": parser = argparse.ArgumentParser(description="Chemotherapy Process Script") - parser.add_argument('-d', '--database', help="Path to chemo_drug's database", - default='/home/zhangchao/project/pipeline/workflow/script/public/chemo_database.xlsx') + parser.add_argument('-d', '--database', help="Path to chemo_drug's database", required=True) parser.add_argument('-probe', '--probe', help="Probe name", required=True) parser.add_argument('-n', '--name', help="Name for sample", required=True) parser.add_argument('-v', '--vcf', help="germline vcf", required=True) diff --git a/script/filter_cnv.pl b/script/filter_cnv.pl index 0d9c423..6f958fe 100755 --- a/script/filter_cnv.pl +++ b/script/filter_cnv.pl @@ -7,9 +7,10 @@ open IN, "$ARGV[0]"; open OUT, ">$ARGV[1]"; my $project = $ARGV[2]; -my $public_path = defined $ENV{'PUBLIC'} ? $ENV{'PUBLIC'} : "/dataseq/jmdna/codes/public/"; +# my $public_path = defined $ENV{'PUBLIC'} ? $ENV{'PUBLIC'} : "/dataseq/jmdna/codes/public/"; +my $database_path = defined $ENV{'DATABASE'} ? $ENV{'DATABASE'} : "/dataseq/jmdna/codes/reportbase"; -print "Cnv过滤使用public路径:$public_path\n"; +print "Cnv过滤使用database路径:$database_path\n"; my $cnv = info(); my @cnv_list = @$cnv; @@ -22,7 +23,7 @@ print OUT join("\t", (@head[0 .. 4], "ref_gene", "copy", @head[5 .. 9])), "\n"; while () { chomp; my @line = split(/\t/, $_); - my $cn = sprintf("%.2f", 2 ** (1 + $line[4])); + my $cn = sprintf("%.1f", 2 ** (1 + $line[4])); my @gene_list = split(/,/, $line[3]); my %uniq; foreach my $element (@gene_list) { @@ -38,7 +39,7 @@ while () { } sub info { - open INFO, "$public_path/info.csv"; + open INFO, "$database_path/info.csv"; # 读取并解析表头 my $header = ; chomp($header); diff --git a/script/filter_fusion.pl b/script/filter_fusion.pl index 84c9a04..07eac4b 100755 --- a/script/filter_fusion.pl +++ b/script/filter_fusion.pl @@ -6,8 +6,10 @@ die "usage:perl $0 depth_file input out project" unless @ARGV == 4; my ($depth_file, $input, $out, $project) = @ARGV; my $public_path = defined $ENV{'PUBLIC'} ? $ENV{'PUBLIC'} : "/dataseq/jmdna/codes/public/"; +my $database_path = defined $ENV{'DATABASE'} ? $ENV{'DATABASE'} : "/dataseq/jmdna/codes/reportbase"; print "Fusion过滤使用public路径:$public_path\n"; +print "Fusion过滤使用database路径:$database_path\n"; open IN, "$input"; open OUT1, "> $out"; @@ -189,7 +191,7 @@ sub gene2strand { } sub info { - open INFO, "$public_path/info.csv"; + open INFO, "$database_path/info.csv"; # 读取并解析表头 my $header = ; chomp($header); diff --git a/script/filter_longindel.pl b/script/filter_longindel.pl index 59a55a7..483daf0 100755 --- a/script/filter_longindel.pl +++ b/script/filter_longindel.pl @@ -4,9 +4,12 @@ use warnings; die "usage:perl $0 input out project" unless @ARGV == 3; my ($input, $out, $project) = @ARGV; -my $public_path = defined $ENV{'PUBLIC'} ? $ENV{'PUBLIC'} : "/dataseq/jmdna/codes/public/"; +# my $public_path = defined $ENV{'PUBLIC'} ? $ENV{'PUBLIC'} : "/dataseq/jmdna/codes/public/"; +# +# print "LongIndel过滤使用public路径:$public_path\n"; +my $database_path = defined $ENV{'DATABASE'} ? $ENV{'DATABASE'} : "/dataseq/jmdna/codes/reportbase"; -print "LongIndel过滤使用public路径:$public_path\n"; +print "longindel过滤使用database路径:$database_path\n"; open IN, "$input"; open LONGINDEL, "> $out"; @@ -40,7 +43,7 @@ while () { } sub info { - open INFO, "$public_path/info.csv"; + open INFO, "$database_path/info.csv"; # 读取并解析表头 my $header = ; chomp($header); diff --git a/script/filter_promoter.pl b/script/filter_promoter.pl new file mode 100755 index 0000000..98868fd --- /dev/null +++ b/script/filter_promoter.pl @@ -0,0 +1,52 @@ +#!/usr/bin/env perl +use strict; + +my ($name, $output_dir, $project) = @ARGV; +die "useage:perl $0 codes_dir name output_dir project" unless @ARGV == 4; + +my $public_path = defined $ENV{'PUBLIC'} ? $ENV{'PUBLIC'} : "/dataseq/jmdna/codes/public/"; +open INFO, "$public_path/info.csv"; +; +my @promoter; +while () { + chomp; + my @line = split(/\t/, $_); + if ($line[0] eq $project) { + if ($line[4] ne "NA") { + @promoter = split(/\//, $line[4]); + open PRMT, ">$output_dir/mutation/${name}.target.promoter.txt"; + } + } +} + +my @prmt; + +open IN2, "$output_dir/mutation/${name}.snp.indel.Somatic.annoall.hg19_multianno.txt"; +; +while () { + chomp; + my @line = split(/\t/, $_); + + if (@promoter and grep {$line[6] eq $_} @promoter) { + if ($line[5] =~ /UTR3|upstream/ and $line[17] < 0.01 + and $line[18] < 0.01 and $line[19] < 0.01 and $line[20] < 0.01 and $line[23] < 0.01 and $line[28] < 0.01 and $line[32] < 0.01) { + my @var = split(/;/, $line[9]); + my $freq = (split(/:/, $line[-2]))[5]; + my $dp4 = join(",", (split(/:/, $line[-2]))[2, 4, -1]); + my $predict_benign = 0; + $predict_benign++ if ($line[50] eq "N" or $line[50] eq "P"); + $predict_benign++ if $line[56] eq "T"; + $predict_benign++ if $line[64] eq "T"; + if ($line[6] eq 'TERT') { + push @prmt, join("\t", @line[0 .. 9], $freq, $dp4, $predict_benign, @line[10, 11, 16, 18, $#line]) + if (($line[1] eq '1295228' and $line[4] eq 'A') or ($line[1] eq '1295250' and $line[4] eq 'A')); + } + } + } +} + +if (@prmt) { + print PRMT join("\t", @head[0 .. 9]), "\tFreq", "\tDP-AD-DP4", "\tpredict_benign(MutationTaster/FATHMM/MetaSVM)\t", join("\t", @head[10, 11, 16, 18]), "\tSTR", "\n"; + print PRMT join("\n", @prmt) . "\n"; +} + diff --git a/script/filter_snpindel.pl b/script/filter_snpindel.pl index 7be7d12..57efe45 100755 --- a/script/filter_snpindel.pl +++ b/script/filter_snpindel.pl @@ -243,7 +243,7 @@ sub blacklist { sub info { - open INFO, "$public_path/info.csv"; + open INFO, "$database_path/info.csv"; # 读取并解析表头 my $header = ; chomp($header); diff --git a/script/hereditary.py b/script/hereditary.py index 1fcaacd..c1b82ae 100755 --- a/script/hereditary.py +++ b/script/hereditary.py @@ -65,8 +65,7 @@ class HereditaryRun: if __name__ == "__main__": parser = argparse.ArgumentParser(description="hereditary Process Script") - parser.add_argument('-d', '--database', help="Path to hereditary_mut's database", - default='/home/zhangchao/project/pipeline/workflow/script/public/hereditary_database.xlsx') + parser.add_argument('-d', '--database', help="Path to hereditary_mut's database", required=True) parser.add_argument('-p', '--project', help="Project name", required=True) parser.add_argument('-n', '--name', help="Name for sample", required=True) parser.add_argument('-f', '--file', help="germline filter file", required=True) diff --git a/script/indication.pl b/script/indication.pl index 83c7ed4..8a344bd 100755 --- a/script/indication.pl +++ b/script/indication.pl @@ -2,14 +2,14 @@ use strict; use warnings; -my ($output_dir,$cancer_type)=@ARGV; -die "useage:perl $0 output_dir cancer_type" unless @ARGV==2; +my ($output_dir, $cancer_type) = @ARGV; +die "useage:perl $0 output_dir cancer_type" unless @ARGV == 2; my $database_path = defined $ENV{'DATABASE'} ? $ENV{'DATABASE'} : "/dataseq/jmdna/codes/reportbase"; print "Indication药物注释使用路径:$database_path\n"; -open OUT,">$output_dir/mutation/indication.txt"; +open OUT, ">$output_dir/mutation/indication.txt"; print OUT "基因\t检测内容\t检测情况\t肿瘤类型\n"; ##本癌种FDA/NMPA/NCCN批准基因检测 =pod @@ -26,56 +26,58 @@ while(){ } =cut -open DIS,"/dataseq/jmdna/codes/reportbase/oncotree.cancertype.20230801.txt"; +open DIS, "$database_path/oncotree.cancertype.20230801.txt"; ; -my (%dis,@id,%dis2); -while(){ - chomp; - my @line=split(/\t/); - $dis{lc$line[2]}=$line[3]; - $dis{lc$line[4]}=$line[5]; - push @{$dis2{$line[0]}},lc$line[2]; - push @{$dis2{$line[0]}},lc$line[4]; - push @id,$line[0]; +my (%dis, @id, %dis2); +while () { + chomp; + my @line = split(/\t/); + $dis{lc $line[2]} = $line[3]; + # $dis{lc $line[4]} = $line[5]; + push @{$dis2{$line[0]}}, lc $line[2]; + # push @{$dis2{$line[0]}}, lc $line[4]; + push @id, $line[0]; } -foreach my $ID($cancer_type){ - my @family; - my @ids=split("",$ID); - for (my $i=1;$i<@ids;$i=$i+2){ - push @family,join("",@ids[0..$i]); - } - push @family,(grep{/^$ID/}@id); - foreach my $t(@family){ - push @{$dis2{$ID}},@{$dis2{$t}}; - } +foreach my $ID ($cancer_type) { + my @family; + my @ids = split("", $ID); + for (my $i = 1; $i < @ids; $i = $i + 2) { + push @family, join("", @ids[0 .. $i]); + } + push @family, (grep {/^$ID/} @id); + foreach my $t (@family) { + push @{$dis2{$ID}}, @{$dis2{$t}}; + } } -foreach my $key(keys(%dis2)){ - my %uniq; - @{$dis2{$key}}=grep{++$uniq{$_}<2}@{$dis2{$key}}; +foreach my $key (keys(%dis2)) { + my %uniq; + @{$dis2{$key}} = grep {++$uniq{$_} < 2} @{$dis2{$key}}; } ##靶向用药信息 -open THERAPY,"$database_path/targetTherapy.txt"; - ; +open THERAPY, "$database_path/targetTherapy.txt"; +; my %therapy; my %cancer; -while(){ - chomp; - my @line=split("\t"); - if($line[9] eq 'V' and $line[14] eq 'A' and (grep{lc$line[2] eq lc$_}@{$dis2{$cancer_type}}) and $line[0]!~/,/){ - push @{$cancer{$line[0]}},$dis{lc$line[2]} if !(grep{$_ eq $dis{lc$line[2]}}@{$cancer{$line[0]}}); - if($line[1]=~/fusion/i){ - push @{$therapy{$line[0]}},'融合' if !(grep{$_ eq '融合'}@{$therapy{$line[0]}}); - }elsif($line[1] eq "Deletion" or $line[1]=~ /Amplification/){ - push @{$therapy{$line[0]}},'扩增' if !(grep{$_ eq '扩增'}@{$therapy{$line[0]}}); - }else{ - push @{$therapy{$line[0]}},'突变' if !(grep{$_ eq '突变'}@{$therapy{$line[0]}});; - } - } +while () { + chomp; + my @line = split("\t"); + if ($line[9] eq 'V' and $line[14] eq 'A' and (grep {lc $line[2] eq lc $_} @{$dis2{$cancer_type}}) and $line[0] !~ /,/) { + push @{$cancer{$line[0]}}, $dis{lc $line[2]} if !(grep {$_ eq $dis{lc $line[2]}} @{$cancer{$line[0]}}); + if ($line[1] =~ /fusion/i) { + push @{$therapy{$line[0]}}, '融合' if !(grep {$_ eq '融合'} @{$therapy{$line[0]}}); + } + elsif ($line[1] eq "Deletion" or $line[1] =~ /Amplification/) { + push @{$therapy{$line[0]}}, '扩增' if !(grep {$_ eq '扩增'} @{$therapy{$line[0]}}); + } + else { + push @{$therapy{$line[0]}}, '突变' if !(grep {$_ eq '突变'} @{$therapy{$line[0]}});; + } + } } -for my $gene(sort keys %therapy){ - print OUT "$gene\t",join("/",@{$therapy{$gene}}),"\t未检出变异\t",join("/",@{$cancer{$gene}}),"\n"; +for my $gene (sort keys %therapy) { + print OUT "$gene\t", join("/", @{$therapy{$gene}}), "\t未检出变异\t", join("/", @{$cancer{$gene}}), "\n"; } diff --git a/script/pollution.py b/script/pollution.py new file mode 100755 index 0000000..ef8776f --- /dev/null +++ b/script/pollution.py @@ -0,0 +1,287 @@ +#!/usr/bin/env python3 + +import argparse +import os + +import pandas as pd + + +def single_monitoring(name, vcf, bed, freq_range, output_dir): + vcf_header = [] # 用于存储VCF文件头部分 + vcf_data = [] # 用于存储筛选后的VCF数据 + p_value_list = [] # 用于存储符合条件的 p-value + + # 按行处理,保存为列表 + with open(vcf, 'r') as vcf_file: + for line in vcf_file: + if line.startswith("#"): + vcf_header.append(line) + else: + vcf_data.append(line) + + # bed 处理 + df_position = pd.read_csv(bed, sep='\t', header=None, names=range(4)) + position_list = list(df_position[2]) + chr_list = list(df_position[0]) + result_data = [] + + for i in range(len(position_list)): + filtered_lines = [line for line in vcf_data if + line.split()[1] == str(position_list[i]) and line.split()[0] == str(chr_list[i]) and len( + line.split()[3]) < 2 and len(line.split()[4]) < 2] + for line in filtered_lines: + p_value_str = line.split()[9].split(":")[4] + p_value = float(p_value_str[:-1]) / 100 if p_value_str[-1] == "%" else float(p_value_str) + if 0.1 <= p_value <= 0.9: + result_data.append(line) + p_value_list.append(p_value) + select_vcf = os.path.join(output_dir, f'{name}_select.vcf') + with open(select_vcf, 'w') as output: + for header_line in vcf_header: + output.write(header_line) + for data_line in result_data: + output.write(data_line) + + count_normal = 0 + count_exception = 0 + for p_value in p_value_list: + if freq_range[0] <= p_value <= freq_range[1]: + count_normal += 1 + else: + count_exception += 1 + count_all = count_exception + count_normal + if count_all == 0: + z_score = 0 + else: + z_score = count_exception / count_all + + res = dict( + barcode=name, + count_normal=count_normal, + count_exception=count_exception, + z_score=z_score + ) + pd.DataFrame([res]).to_csv(os.path.join(f'{name}_pollution.csv'), sep="\t", index=False) + + +# 根据小bed筛选vcf +def select_position(vcf, bed, matched_file, unmatched_file): + vcf_header = [] # 用于存储VCF文件头部分 + vcf_data = [] # 用于存储筛选后的VCF数据 + + # 按行处理,保存为列表 + with open(vcf, 'r') as vcf_file: + for line in vcf_file: + if line.startswith("#"): + vcf_header.append(line) + else: + vcf_data.append(line) + + df_position = pd.read_csv(bed, sep='\t', header=None, names=range(4)) + position_list = list(df_position[2]) + chr_list = list(df_position[0]) + result_data = [] + unmatched_data = [] # 用于存储未匹配的数据 + + for i in range(len(position_list)): + filtered_lines = [line for line in vcf_data if + line.split()[1] == str(position_list[i]) and line.split()[0] == str(chr_list[i]) and len( + line.split()[3]) < 2 and len(line.split()[4]) < 2] + if not filtered_lines: # 如果没有匹配的点,添加到未匹配数据列表 + unmatched_data.append(f"{chr_list[i]}\t{position_list[i]}\t.\t.\t.\t.\t.\n") + result_data.extend(filtered_lines) + + with open(matched_file, 'w') as output: + for header_line in vcf_header: + output.write(header_line) + for data_line in result_data: + output.write(data_line) + + with open(unmatched_file, 'w') as unmatched_output: + unmatched_output.writelines(unmatched_data) + + return matched_file, unmatched_file + + +# 处理体系、胚系的vcf,得到目标信息 +def process_judge_vcf(input_vcf, output_vcf): + with open(input_vcf, 'r') as input_file, open(output_vcf, 'w') as output_file: + for line in input_file: + if not line.startswith("#"): + fields = line.strip().split('\t') + info = fields[9].split(":") + percentage = float(info[4]) + + if 0.1 <= percentage <= 0.9: + b = 0.5 + elif percentage < 0.1: + b = 0 + elif percentage > 0.9: + b = 1 + + # 构建新的行数据 + new_line = '\t'.join([fields[0], fields[1], fields[3], fields[4], info[4], str(b), info[2]]) + output_file.write(new_line + '\n') + return output_vcf + + +def merge_and_sort_files(matched_file, unmatched_file, output_file): + # 检查 unmatched_file 是否为空 + if os.stat(unmatched_file).st_size == 0: + # 对 matched_file 进行排序并写入 output_file + matched_df = pd.read_csv(matched_file, sep='\t', header=None) + sorted_df = matched_df.sort_values(by=[0, 1]) + sorted_df.to_csv(output_file, sep='\t', header=False, index=False) + return output_file + + # 如果 unmatched_file 不为空,继续合并和排序操作 + matched_df = pd.read_csv(matched_file, sep='\t', header=None) + unmatched_df = pd.read_csv(unmatched_file, sep='\t', header=None) + + # 合并数据帧 + combined_df = pd.concat([matched_df, unmatched_df]) + + # 根据第一列和第二列排序 + sorted_df = combined_df.sort_values(by=[0, 1]) + + # 将排序后的数据写入输出文件 + sorted_df.to_csv(output_file, sep='\t', header=False, index=False) + return output_file + + +# 合并体系,胚系 +def merge_and_compare_files(somatic_file, germline_file, output_merged_file, output_final_file): + # 合并两个文件 + with open(somatic_file, 'r') as somatic, open(germline_file, 'r') as germline: + merged_lines = [f"{somatic_line.strip()}\t{germline_line.strip()}" for somatic_line, germline_line in + zip(somatic, germline)] + + # 将合并后的数据写入输出文件 + with open(output_merged_file, 'w') as output_file: + output_file.write('\n'.join(merged_lines)) + + # 比较两列数据并添加比较结果列 + with open(output_merged_file, 'r') as merged, open(output_final_file, 'w') as final_output: + for line in merged: + fields = line.strip().split('\t') + if fields[5] == fields[12]: + comparison_result = "yes" + else: + comparison_result = "no" + final_output.write(f"{line.strip()}\t{comparison_result}\n") + return output_merged_file, output_final_file + + +# 根据大bed筛选vcf,作cnvkit的图 +def select_cnvkit_vcf(vcf, bed, output_file): + vcf_header = [] # 用于存储VCF文件头部分 + vcf_data = [] # 用于存储筛选后的VCF数据 + p_value_list = [] # 用于存储符合条件的 p-value + + # 按行处理,保存为列表 + with open(vcf, 'r') as vcf_file: + for line in vcf_file: + if line.startswith("#"): + vcf_header.append(line) + else: + vcf_data.append(line) + + df_position = pd.read_csv(bed, sep='\t', header=None, names=range(4)) + position_list = list(df_position[2]) + chr_list = list(df_position[0]) + result_data = [] + for i in range(len(position_list)): + filtered_lines = [line for line in vcf_data if + line.split()[1] == str(position_list[i]) and line.split()[0] == str(chr_list[i]) and len( + line.split()[3]) < 2 and len(line.split()[4]) < 2] + for line in filtered_lines: + p_value_str = line.split()[9].split(":")[4] + p_value = float(p_value_str[:-1]) / 100 if p_value_str[-1] == "%" else float(p_value_str) + if 0.1 <= p_value <= 0.9: + result_data.append(line) + + with open(output_file, 'w') as output: + for header_line in vcf_header: + output.write(header_line) + for data_line in result_data: + output.write(data_line) + + return output_file + + +def paired_monitoring(name, somatic_vcf, germline_vcf, ref_bed, cnvkit_ref_bed, output_dir): + # 处理体系,根据bed筛选 + select_position_output_file1 = os.path.join(output_dir, f'{name}_somatic_matched.vcf') + select_position_output_file2 = os.path.join(output_dir, f'{name}_somatic_unmatched.vcf') + somatic_matched_file, somatic_unmatched_file = select_position(somatic_vcf, ref_bed, select_position_output_file1, + select_position_output_file2) + # 处理胚系,根据bed筛选 + select_position_output_file3 = os.path.join(output_dir, f'{name}_germline_matched.vcf') + select_position_output_file4 = os.path.join(output_dir, f'{name}_germline_unmatched.vcf') + Germline_matched_file, Germline_unmatched_file = select_position(germline_vcf, ref_bed, + select_position_output_file3, + select_position_output_file4) + # 处理体系,数值转换 + process_judge_vcf_file1 = os.path.join(output_dir, f'{name}_somatic_matched_add_judge.vcf') + somatic_matched_add_judge_file = process_judge_vcf(somatic_matched_file, process_judge_vcf_file1) + # 处理胚系,数值转换 + process_judge_vcf_file2 = os.path.join(output_dir, f'{name}_germline_matched_add_judge.vcf') + germline_matched_add_judge_file = process_judge_vcf(Germline_matched_file, process_judge_vcf_file2) + # 合并体系,将匹配到的和未匹配到bed的的合并 + merge_and_sort_files_file1 = os.path.join(output_dir, f'{name}_somatic_merged.vcf') + somatic_merged_file = merge_and_sort_files(somatic_matched_add_judge_file, somatic_unmatched_file, + merge_and_sort_files_file1) + # 合并胚系,将匹配到的和未匹配到bed的的合并 + merge_and_sort_files_file2 = os.path.join(output_dir, f'{name}_germline__merged.vcf') + Germline_merged_file = merge_and_sort_files(germline_matched_add_judge_file, Germline_unmatched_file, + merge_and_sort_files_file2) + # 合并胚系,体系,将体系,胚系两个合并文件再合并 + result_pro_file = os.path.join(output_dir, f'{name}_result_pro.txt') + result_file = os.path.join(output_dir, f'{name}_contaminate_result.txt') + merge_and_compare_files(somatic_merged_file, Germline_merged_file, result_pro_file, result_file) + ##筛选作图vcf + cnvkit_output_file = os.path.join(output_dir, f'{name}_select_cnvkit.vcf') + select_cnvkit_vcf(germline_vcf, cnvkit_ref_bed, cnvkit_output_file) + ##删除中间文件 + os.remove(select_position_output_file1) + os.remove(select_position_output_file2) + os.remove(select_position_output_file3) + os.remove(select_position_output_file4) + os.remove(process_judge_vcf_file1) + os.remove(process_judge_vcf_file2) + os.remove(merge_and_sort_files_file1) + os.remove(merge_and_sort_files_file2) + os.remove(result_pro_file) + + +if __name__ == '__main__': + parser = argparse.ArgumentParser(description="Pollution Process Script") + + parser.add_argument('-n', '--name', help="Name for sample", required=True) + parser.add_argument('-b', '--ref_bed', help="ref_bed", required=True) + parser.add_argument('-v', '--vcf', help="raw vcf for prbe 160 or 17 ; somatic vcf for prbe 682 or 624", + required=True) + parser.add_argument('-v2', '--vcf2', help="germline vcf; required when prbe 682 or 624") + parser.add_argument('-c', '--cnvkit_bed', help="cnvkit_bed; required when prbe 682 or 624") + parser.add_argument('-p', '--probe', help="probe, 682, 624, 160, 17 for now ", required=True) + parser.add_argument('-o', '--output_dir', help="Output directory, default ./", default='') + args = parser.parse_args() + + bed_path = os.path.realpath(args.ref_bed) + print(f'污染检测使用ref_bed: {bed_path}') + probe = args.probe + + if probe == '160' or probe == '17': + freq_range = {"17": [0.3452, 0.6512], "160": [0.2930, 0.6753]}.get(probe) + single_monitoring(args.name, args.vcf, bed_path, freq_range, args.output_dir) + elif probe == '682' or probe == '624': + if not args.vcf2: + parser.error('--vcf2 is required in prbe 682 or 624') + if not args.cnvkit_bed: + parser.error('--cnvkit_bed is required in prbe 682 or 624') + cnvkit_bed_path = os.path.realpath(args.cnvkit_bed) + print(f'污染检测使用cnvkit_bed: {cnvkit_bed_path}') + paired_monitoring(args.name, args.vcf, args.vcf2, bed_path, args.cnvkit_bed, args.output_dir) + else: + parser.error('probe error. 682, 624, 160, 17 for now') + diff --git a/script/postprocess.py b/script/postprocess.py index c9af826..eafe461 100755 --- a/script/postprocess.py +++ b/script/postprocess.py @@ -17,7 +17,9 @@ def database(): 增持匹配信息 """ - path = os.environ.get('DATABASE', '/home/zhangchao/project/pipeline/workflow/database/') + path = os.environ.get('DATABASE') + if not path: + raise UserWarning('未设置DATABASE环境变量') # gene function 基因功能描述信息 gene_function_path = os.path.join(path, 'gene_function.txt') gene_function_df = pd.read_csv(gene_function_path, sep='\t') diff --git a/script/public/pollution/160_contaminate_ref.bed b/script/public/pollution/160_contaminate_ref.bed new file mode 100644 index 0000000..cfdf615 --- /dev/null +++ b/script/public/pollution/160_contaminate_ref.bed @@ -0,0 +1,634 @@ +chr5 224633 224633 +chr5 226160 226160 +chr5 228362 228362 +chr5 230980 230980 +chr5 231111 231111 +chr5 231143 231143 +chr5 233734 233734 +chr5 251784 251784 +chr5 256451 256451 +chr5 256472 256472 +chr11 534242 534242 +chr18 673447 673447 +chr18 673449 673449 +chr19 1208289 1208289 +chr19 1220321 1220321 +chr19 1221161 1221161 +chr19 1222012 1222012 +chr4 1801064 1801064 +chr4 1805478 1805478 +chr4 1806519 1806519 +chr4 1807894 1807894 +chr16 2103408 2103408 +chr16 2120402 2120402 +chr16 2138219 2138219 +chr19 3110349 3110349 +chr19 3113305 3113305 +chr19 3114954 3114954 +chr19 3115124 3115124 +chr19 3119184 3119184 +chr19 3119239 3119239 +chr11 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+chr13 28609825 28609825 +chr13 32936646 32936646 +chr13 113889474 113889474 +chr13 113907391 113907391 +chr14 105239894 105239894 +chr14 105246325 105246325 +chr14 38064215 38064215 +chr14 20820537 20820537 +chr14 35871217 35871217 +chr15 41865488 41865488 +chr15 51502986 51502986 +chr15 51529112 51529112 +chr15 99456253 99456253 +chr15 99478225 99478225 +chr15 51558731 51558731 +chr16 68857441 68857441 +chr16 359953 359953 +chr16 89805977 89805977 +chr16 89838078 89838078 +chr16 89857964 89857964 +chr17 7983969 7983969 +chr17 29486152 29486152 +chr17 29508775 29508775 +chr17 29546175 29546175 +chr17 29559932 29559932 +chr17 29653293 29653293 +chr17 37879762 37879762 +chr17 62007498 62007498 +chr17 78919558 78919558 +chr19 3110349 3110349 +chr19 3119239 3119239 +chr19 4101062 4101062 +chr19 11136215 11136215 +chr19 15289613 15289613 +chr19 15295134 15295134 +chr19 41725271 41725271 +chr20 43956527 43956527 +chr20 43956636 43956636 +chr20 43958850 43958850 +chr20 43958872 43958872 +chr20 54959296 54959296 +chr20 54961541 54961541 +chr21 37518706 37518706 +chr21 39752673 39752673 +chr21 39753375 39753375 +chr22 41568480 41568480 +chr22 30038152 30038152 +chr22 30079213 30079213 +chrX 76937963 76937963 +chrX 39922359 39922359 +chrX 39932907 39932907 +chrX 44938563 44938563 +chrX 100608191 100608191 +chrX 100611285 100611285 +chrX 76940534 76940534 diff --git a/script/public/pollution/contaminate_650.bed b/script/public/pollution/contaminate_650.bed new file mode 100644 index 0000000..6672a76 --- /dev/null +++ b/script/public/pollution/contaminate_650.bed @@ -0,0 +1,128 @@ +chr1 2488153 2488153 +chr1 23885599 23885599 +chr1 65321388 65321388 +chr1 120612006 120612006 +chr1 193094375 193094375 +chr1 226570840 226570840 +chr2 47693959 47693959 +chr2 48030838 48030838 +chr2 61749716 61749716 +chr2 141032088 141032088 +chr2 215645464 215645464 +chr3 30686414 30686414 +chr3 47125385 47125385 +chr3 134644636 134644636 +chr3 142281612 142281612 +chr3 192053274 192053274 +chr4 55599436 55599436 +chr4 143007419 143007419 +chr4 153252061 153252061 +chr4 185310218 185310218 +chr4 25666099 25666099 +chr5 35857177 35857177 +chr5 38955796 38955796 +chr5 39074296 39074296 +chr5 67522722 67522722 +chr5 112162854 112162854 +chr5 149435759 149435759 +chr5 161119125 161119125 +chr5 170819887 170819887 +chr5 180046344 180046344 +chr6 30858857 30858857 +chr6 32797876 32797876 +chr6 36645696 36645696 +chr6 117678083 117678083 +chr6 117714346 117714346 +chr7 2946461 2946461 +chr7 2962753 2962753 +chr7 87138645 87138645 +chr7 151970931 151970931 +chr8 90955624 90955624 +chr8 90970935 90970935 +chr8 90995019 90995019 +chr8 68864728 68864728 +chr8 38322346 38322346 +chr8 145742879 145742879 +chr9 5081780 5081780 +chr9 8389364 8389364 +chr9 93657761 93657761 +chr9 98209594 98209594 +chr9 21991923 21991923 +chr9 37020622 37020622 +chr9 21975017 21975017 +chr10 43600689 43600689 +chr10 89720907 89720907 +chr10 104596981 104596981 +chr10 104849468 104849468 +chr10 104855656 104855656 +chr10 123239112 123239112 +chr11 32410774 32410774 +chr11 69462910 69462910 +chr11 94197260 94197260 +chr11 94225807 94225807 +chr11 94225920 94225920 +chr11 125497466 125497466 +chr12 1040373 1040373 +chr12 4553383 4553383 +chr12 6711147 6711147 +chr12 21331625 21331625 +chr12 49427652 49427652 +chr12 49444545 49444545 +chr12 121416622 121416622 +chr12 133202215 133202215 +chr13 21562948 21562948 +chr13 28609825 28609825 +chr13 32936646 32936646 +chr13 113889474 113889474 +chr13 113907391 113907391 +chr14 105239894 105239894 +chr14 105246325 105246325 +chr14 38064215 38064215 +chr14 20820537 20820537 +chr14 35871217 35871217 +chr15 41865488 41865488 +chr15 51502986 51502986 +chr15 51529112 51529112 +chr15 99456253 99456253 +chr15 99478225 99478225 +chr15 51558731 51558731 +chr16 68857441 68857441 +chr16 359953 359953 +chr16 89805977 89805977 +chr16 89838078 89838078 +chr16 89857964 89857964 +chr17 7983969 7983969 +chr17 29486152 29486152 +chr17 29508775 29508775 +chr17 29546175 29546175 +chr17 29559932 29559932 +chr17 29653293 29653293 +chr17 37879762 37879762 +chr17 62007498 62007498 +chr17 78919558 78919558 +chr19 3110349 3110349 +chr19 3119239 3119239 +chr19 4101062 4101062 +chr19 11136215 11136215 +chr19 15289613 15289613 +chr19 15295134 15295134 +chr19 41725271 41725271 +chr20 43956527 43956527 +chr20 43956636 43956636 +chr20 43958850 43958850 +chr20 43958872 43958872 +chr20 54959296 54959296 +chr20 54961541 54961541 +chr21 37518706 37518706 +chr21 39752673 39752673 +chr21 39753375 39753375 +chr22 41568480 41568480 +chr22 30038152 30038152 +chr22 30079213 30079213 +chrX 76937963 76937963 +chrX 39922359 39922359 +chrX 39932907 39932907 +chrX 44938563 44938563 +chrX 100608191 100608191 +chrX 100611285 100611285 +chrX 76940534 76940534 diff --git a/script/run_pipeline.py b/script/run_pipeline.py index 0cf5c42..b3ae3d8 100755 --- a/script/run_pipeline.py +++ b/script/run_pipeline.py @@ -5,6 +5,15 @@ import os run_wdl_path = os.path.join(os.path.dirname(__file__), 'run_wdl.py') + +def environ_test(): + workflow_path = os.environ.get('WORKFLOW', None) + public_path = os.environ.get('PUBLIC', None) + database_path = os.environ.get('DATABASE', None) + if not (workflow_path and public_path and database_path): + raise UserWarning('未设置WORKFLOW, PUBLIC, DATABASE环境') + + if __name__ == '__main__': parser = argparse.ArgumentParser(description="JM to run pipeline") @@ -20,10 +29,13 @@ if __name__ == '__main__': parser.add_argument('-node', '--start_node', help="node begain to run; 'addQc', 'addAlignment', " "'addTarget', 'addFusion', 'addCnv', 'addMsi', 'addChemo'," - " 'addHcs, addTmb, addAutoReport' and also run more than one node ,like this 'addTarget,addFusion'", + " 'addHcs, addTmb, addAutoReport' and also run more than one " + "node ,like this 'addTarget,addFusion'", default='addQc') args = parser.parse_args() + environ_test() + res_path = os.path.realpath(os.path.join(args.output_dir, args.barcode)) if not os.path.exists(res_path): @@ -36,6 +48,6 @@ if __name__ == '__main__': f'-o {res_path} -b {args.probe} -p {args.project} -c {args.cancer} -w {args.wdl} ' \ f'> {res_path}/{args.barcode}_run.log ' \ f'2>> {res_path}/{args.barcode}_run.log &' - with open(os.path.join(res_path, 'exec'), 'w') as execfile: - execfile.write(cmd + '\n') + # with open(os.path.join(res_path, 'exec'), 'w') as execfile: + # execfile.write(cmd + '\n') os.system(cmd) diff --git a/script/run_wdl.py b/script/run_wdl.py index cebbc4b..3fdc868 100755 --- a/script/run_wdl.py +++ b/script/run_wdl.py @@ -39,7 +39,7 @@ def get_catecode(project, start_node='addQc'): } runcode = get_branch_nodes(dag, start_node) - public = os.environ.get('PUBLIC', '/home/zhangchao/project/pipeline/workflow/script/public') + public = os.environ.get('DATABASE') path = os.path.join(public, 'info.csv') info = pd.read_csv(path) project = info[info['project'] == project]['CateCode'] @@ -83,15 +83,16 @@ def run(barcode, normal, umi, input_dir, output_dir, project, cancer, probe, wdl jsfile.write(json.dumps(arg, indent=4, ensure_ascii=False)) # run pipeline - cmd1 = 'export PATH=/home/zhangchao/project/pipeline/workflow/script:$PATH' - cmd2 = 'export PUBLIC=/home/zhangchao/project/pipeline/workflow/script/public' + # cmd1 = 'export PATH=/home/zhangchao/project/pipeline/workflow/script:$PATH' + # cmd2 = 'export PUBLIC=/home/zhangchao/project/pipeline/workflow/script/public' cmd3 = f'cd {output_dir}' # f'{"-Dcall-caching.enabled=false " if uncache else ""}' # f'-Dconfig.file=/home/zhangchao/project/pipeline/workflow/script/cromwell.examples.conf ' \ - cmd4 = f'/usr/bin/java -jar /home/zhangchao/project/pipeline/workflow/software/cromwell-51.jar run --inputs {jsfile_path} {wdl}' - cmd = f'{cmd1}; {cmd2}; {cmd3}; {cmd4}' + cmd4 = f'/usr/bin/java -jar $WORKFLOW/software/cromwell-51.jar run --inputs {jsfile_path} {wdl}' + # cmd = f'{cmd1}; {cmd2}; {cmd3}; {cmd4}' + cmd = f'{cmd3}; {cmd4}' # 记录开始时间 start_time = time.time() @@ -128,7 +129,8 @@ if __name__ == '__main__': parser.add_argument('-node', '--start_node', help="node begain to run; 'addQc', 'addAlignment', " "'addTarget', 'addFusion', 'addCnv', 'addMsi', 'addChemo'," - " 'addHcs, 'addTmb', addAutoReport' and also run more than one node ,like this 'addTarget,addFusion'", + " 'addHcs, 'addTmb', addAutoReport' and also run more than one node ," + "like this 'addTarget,addFusion'", default='addQc') args = parser.parse_args() diff --git a/script/soft_bash b/script/soft_bash new file mode 100755 index 0000000..36034e2 --- /dev/null +++ b/script/soft_bash @@ -0,0 +1,13 @@ +# 目录环境 +export WORKFLOW=/home/zhangchao/project/pipeline/workflow +export PUBLIC=$WORKFLOW/script/public +export DATABASE=$WORKFLOW/database + +# python +export PATH=/dataseq/product/workflow/software/Python-3.8.11/bin:$PATH + +# script +export PATH=$WORKFLOW/script:$PATH + +# software +export PATH=$WORKFLOW/software/bin:$PATH \ No newline at end of file diff --git a/script/target_therapy_cnv.pl b/script/target_therapy_cnv.pl index b436ed0..42af8d3 100755 --- a/script/target_therapy_cnv.pl +++ b/script/target_therapy_cnv.pl @@ -9,7 +9,7 @@ my ($input, $output, $cancer_type) = @ARGV; my $database_path = defined $ENV{'DATABASE'} ? $ENV{'DATABASE'} : "/dataseq/jmdna/codes/reportbase"; print "Cnv药物注释使用路径:$database_path\n"; -open THERAPY, "/dataseq/jmdna/codes/reportbase/targetTherapy.txt"; +open THERAPY, "$database_path/targetTherapy.txt"; my $h1 = ; chomp $h1; my %therapy; @@ -21,7 +21,7 @@ while () { ##药物翻译信息 -open DRUG, "/dataseq/jmdna/codes/reportbase/target_drug.txt"; +open DRUG, "$database_path/target_drug.txt"; my %drug; ; while () { @@ -55,7 +55,7 @@ sub drug { } -open DIS, "/dataseq/jmdna/codes/reportbase/oncotree.cancertype.20230801.txt"; +open DIS, "$database_path/oncotree.cancertype.20230801.txt"; ; my (%dis, @id, %dis2); while () { diff --git a/script/target_therapy_snpindel.pl b/script/target_therapy_snpindel.pl index b4f58d5..d0cef2c 100755 --- a/script/target_therapy_snpindel.pl +++ b/script/target_therapy_snpindel.pl @@ -114,7 +114,7 @@ while () { ($codon =~ /dup/) ? ("Exon $exon insertion") : ("Exon $exon mutation"); } - elsif ($record{'AAChange_refGene'} =~ /splicing/) { + elsif ($record{'Func_refGene'} =~ /splicing/) { $protein = 'Truncating Mutations'; $mut_type = ''; } @@ -123,7 +123,7 @@ while () { $mut_type = ''; } else { - print $_; + print "药物注释未匹配到正确的protein或者mut_type"; } ##若突变不存在于%mut,写入@vus,若突变存在于%mut且neutral,写入@neg;若基因不存在于%therapy,写入@vus; diff --git a/wdl/alignment.wdl b/wdl/alignment.wdl old mode 100644 new mode 100755 diff --git a/wdl/call_mutation.wdl b/wdl/call_mutation.wdl old mode 100644 new mode 100755 diff --git a/wdl/chemo.wdl b/wdl/chemo.wdl old mode 100644 new mode 100755 index dc020a6..9abb28c --- a/wdl/chemo.wdl +++ b/wdl/chemo.wdl @@ -10,7 +10,7 @@ task run_chemo { if [ ! -d ${output_dir}/chemo ];then mkdir ${output_dir}/chemo fi - chemo.py -probe ${probe} -n ${name} -v ${vcf} -o ${output_dir}/chemo -c ${cancer} -p ${project} + chemo.py -d $DATABASE/chemo_database.xlsx -probe ${probe} -n ${name} -v ${vcf} -o ${output_dir}/chemo -c ${cancer} -p ${project} >>> output { diff --git a/wdl/cnv.wdl b/wdl/cnv.wdl old mode 100644 new mode 100755 diff --git a/wdl/fusion.wdl b/wdl/fusion.wdl old mode 100644 new mode 100755 diff --git a/wdl/hereditary.wdl b/wdl/hereditary.wdl old mode 100644 new mode 100755 index 02b2f2d..388877e --- a/wdl/hereditary.wdl +++ b/wdl/hereditary.wdl @@ -8,7 +8,7 @@ task run_hereditary { if [ ! -d ${output_dir}/hereditary ];then mkdir ${output_dir}/hereditary fi - hereditary.py -p ${project} -n ${name} -f ${filter_txt} -o ${output_dir}/hereditary + hereditary.py -d $DATABASE/hereditary_database.xlsx -p ${project} -n ${name} -f ${filter_txt} -o ${output_dir}/hereditary >>> output { diff --git a/wdl/msi.wdl b/wdl/msi.wdl old mode 100644 new mode 100755 diff --git a/wdl/pollution.wdl b/wdl/pollution.wdl new file mode 100755 index 0000000..854fb56 --- /dev/null +++ b/wdl/pollution.wdl @@ -0,0 +1,65 @@ +task run_pollution { + String name + String output_dir + String probe + String vcf + String? vcf2 + + command <<< + + if [ ! -d ${output_dir}/pollution ];then + mkdir ${output_dir}/pollution + fi + pollution.py -n ${name} \ + -v ${vcf} \ + -v2 ${vcf2} \ + -o ${output_dir}/pollution \ + -p ${probe} \ + -b $PUBLIC/pollution/${probe}_contaminate_ref.bed \ + -c $PUBLIC/pollution/${probe}_contaminate_cnvkit.bed + >>> + + output { + String pollution_res = "${output_dir}/pollution/${name}_pollution.csv" + } +} + +workflow call_pollution { + + Boolean run=true + + String tumor + String? normal + String output_dir + String probe + String raw_vcf + String somatic_vcf + String germline_vcf + + if (run) { + if (defined(normal)) { + call run_pollution as run_pollution_paired { + input: + name=tumor, + output_dir=output_dir, + probe=probe, + vcf=somatic_vcf, + vcf2=germline_vcf + } + } + + if (!defined(normal)) { + call run_pollution as run_pollution_single { + input: + name=tumor, + output_dir=output_dir, + probe=probe, + vcf=raw_vcf + } + } + } + + output { + String pollution_res = "${output_dir}/pollution/${name}_pollution.csv" + } +} \ No newline at end of file diff --git a/wdl/postprocess.wdl b/wdl/postprocess.wdl old mode 100644 new mode 100755 index 7211d7a..da1750b --- a/wdl/postprocess.wdl +++ b/wdl/postprocess.wdl @@ -31,8 +31,9 @@ workflow call_postprocess { String? mutation String? fusion String? cnv - String? msi + String? msi String? hereditary + String? pollution String? chemo String name String? normal @@ -48,9 +49,9 @@ workflow call_postprocess { msi=msi, hereditary=hereditary, chemo=chemo, + pollution=pollution, name=name, normal=normal, - normal=normal, output_dir=output_dir, cancer=cancer } diff --git a/wdl/qc.wdl b/wdl/qc.wdl old mode 100644 new mode 100755 diff --git a/wdl/statistics.wdl b/wdl/statistics.wdl old mode 100644 new mode 100755 diff --git a/wdl/tmb.wdl b/wdl/tmb.wdl old mode 100644 new mode 100755