From 1fefe0740dd97ddbfec6393cd23357870cad335f Mon Sep 17 00:00:00 2001
From: chaopower <chao.zhang@jmdna.com>
Date: Mon, 8 Jan 2024 13:44:07 +0800
Subject: [PATCH] bug

---
 wdl/alignment.wdl | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/wdl/alignment.wdl b/wdl/alignment.wdl
index 2947779..23888eb 100755
--- a/wdl/alignment.wdl
+++ b/wdl/alignment.wdl
@@ -174,7 +174,7 @@ workflow alignment {
             }
 
             if (umi) {
-                call markduplicates_genecore as tumor_markduplicates_genecore {
+                call markduplicates_genecore as tumor_markduplicates_genecore_control {
                     input:
                         name=tumor,
                         ref=ref,
@@ -184,7 +184,7 @@ workflow alignment {
             }
 
             if (!umi) {
-                call markduplicates_picard as tumor_markduplicates_picard {
+                call markduplicates_picard as tumor_markduplicates_picard_control {
                     input:
                         name=tumor,
                         ref=ref,